DY305518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1) HSP 1 Score: 506.908 bits (1304), Expect = 1.002e-142 Identity = 250/307 (81.43%), Postives = 281/307 (91.53%), Query Frame = 2 Query: 2 WRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQIEKQ 922 W+LNYCVGGEVTTM+HLDRPMYLLGYLASQSRV+L+DKEFNV+GYTLLLSLIEYKTLVMRGDL++A+EILP+IPK+ HNSVA FLESRGMIE+A+E+ATDPDYRFELAIQLGRLE+AQEIA EVQSESKWKQLGELAMS+GKL+MAE CMK AMD DAEG++KLA+LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVA+WRKDL KVN KAAESLADPEEYSNLF+DWQVAL+VE+KA T GV+ A+DY +HADKS MTLVEAF+N+Q+E++ Sbjct: 542 WKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYSNLFEDWQVALSVEAKAVETRGVYTGAKDYPSHADKSSMTLVEAFRNLQVEEE 848
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2) HSP 1 Score: 497.664 bits (1280), Expect = 6.078e-140 Identity = 243/308 (78.90%), Postives = 277/308 (89.94%), Query Frame = 2 Query: 2 WRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQIEKQG 925 WRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNV+GYTLLLSLIEYKTLVMRGDLE+ANE+LPSIPKEHHNSVA FLESRGM E+A+EVATDPDYRFELAIQLGRL VA++IA E Q+ESKWKQLGELAMS+GKL+MAE CM+ AMD DA+G+ KLA+LAKEQGKNNVAFLCLFMLG++EDCL LLVESNRIPEAALMARSYLPSKVSEIVA+WR DL K++PKAAESLADPEEY NLF++WQVAL++E++AA T GVHPPA DY +HAD+ + TLV+AF+ MQIE++G Sbjct: 541 WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMRGDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAKEQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKISPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAFRIMQIEEEG 848
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB23_ARATH (Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2 SV=1) HSP 1 Score: 495.738 bits (1275), Expect = 2.310e-139 Identity = 242/307 (78.83%), Postives = 277/307 (90.23%), Query Frame = 2 Query: 2 WRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQIEKQ 922 W+LNYCVGGEVTTM+HLDRPMYLLGY+A+QSRVYL+DKEFNV+GYTLLLSLIEYKTLVMRGDL+RAN+ILP+IPKE HN+VA FLESRGMIE+A+E+ATDPDY+F+LAIQLGRLE+A+EIA EVQSESKWKQLGELAMS+GKL++AE CMK AMD DAEG+SKLA LAKEQGKNNVAFLCLF LG+LEDCLQLLVESNRIPEAALMARSYLPSKVSEIVA+WR+DL KVNPKAAESLADPEEYSNLF+DWQVAL+VE+ A T GV+ AE+Y +HADK +TLVEAF+N+Q+E + Sbjct: 542 WKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDRANQILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSKVNPKAAESLADPEEYSNLFEDWQVALSVEANTAETRGVYTAAENYPSHADKPSITLVEAFRNLQVEAE 848
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB21_ORYSJ (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 3.451e-135 Identity = 239/304 (78.62%), Postives = 265/304 (87.17%), Query Frame = 2 Query: 2 WRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQI 913 WRLNYCVGGEVTTM+HLDRPMYLLGYLA+QSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGD+ERAN+ILPSIPK +N+VA FLESRGM+EEA+E+ATD DYRF+LA+QLG+LEVA+ IA E QSESKWKQLGELAMSTGKL+MAE C+ QA D DAEGI KLAS AKE GKNNVAFLCLFMLGKLEDC+QLL++SNRIPEAALMARSYLPSKVSEIVAIWR DL KVNPKAAESLADP EY NLF+DWQVAL VE A+ +PPA++Y+NHA+KS MTLVEAFK MQ+ Sbjct: 542 WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANDILPSIPKAQYNNVAHFLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAFKRMQV 845
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1) HSP 1 Score: 463.381 bits (1191), Expect = 1.270e-129 Identity = 225/303 (74.26%), Postives = 264/303 (87.13%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQI 913 RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVMRGD +RAN +LPSIPKE H+SVARFLES+GM+EEA+E+ATD +YRF+LA+QLGRLEVA+ IA E QSESKW+QLGELAMSTGKL+MAE C+ AMD DAEG++KL S+AKEQGKNNVAFLC FMLGKLE+CLQLL+ESNRIPEAALM+RSYLPSKV EIV +W+KDLQKVNPKAAESLADP+EY NLF+DWQ+AL VE+ A G++PPAE+Y+ HA++ TLVEAFK+M I Sbjct: 543 RLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALLPSIPKEQHDSVARFLESQGMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWKKDLQKVNPKAAESLADPDEYPNLFEDWQIALNVEANVAPKRGIYPPAEEYIIHAERPNETLVEAFKSMHI 845
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2) HSP 1 Score: 462.996 bits (1190), Expect = 1.659e-129 Identity = 225/306 (73.53%), Postives = 265/306 (86.60%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQIEKQ 922 RLNYCVGGEVTT+FHLDR MYLLGYLA+QSRVYLIDK+FNV+GYTLLL++IEYKTLVMRGD +RAN +LPSIPKE H+SVARFLESRGM+EEA+E+ATD +YRF+LA+QLGRLEVA+ IA E QSESKW+QLGELAMSTGKL+MAE C+ AMD DAEG++KL S+AKEQGKNNVAFLC FMLGKLE+CLQLL+ESNRIPEAALM+RSYLPSKV EIV +W+KDLQKVNPKAAESLADP EY NLF+DWQ+AL VE+ A G++ PA++Y+ HA++ TLVEAFKNM+I ++ Sbjct: 543 RLNYCVGGEVTTLFHLDRQMYLLGYLANQSRVYLIDKQFNVVGYTLLLTMIEYKTLVMRGDFDRANALLPSIPKEQHDSVARFLESRGMLEEALEIATDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMSRSYLPSKVPEIVTLWKKDLQKVNPKAAESLADPNEYPNLFEDWQIALNVEANVAPKRGIYAPAKEYIIHAERPNETLVEAFKNMRIHQE 848
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_RAT (Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3) HSP 1 Score: 292.738 bits (748), Expect = 2.970e-78 Identity = 146/302 (48.34%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ Y ++E K Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKRFQ 843
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_MOUSE (Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 2.970e-78 Identity = 146/302 (48.34%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ Y ++E K Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGFQ 843
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_BOVIN (Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3) HSP 1 Score: 291.967 bits (746), Expect = 5.065e-78 Identity = 146/302 (48.34%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GKL+ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ Y ++E K Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGFQ 843
BLAST of DY305518 vs. ExPASy Swiss-Prot
Match: COPB2_PONAB (Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 8.640e-78 Identity = 145/302 (48.01%), Postives = 202/302 (66.89%), Query Frame = 2 Query: 5 RLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDXXXXXXXXXXXXDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATXGVHPPAEDYVNHADKSYMTLVEAFKNMQ 910 RLNY VGGE+ T+ HLDR MYLLGY+ +R+YL DKE N++ Y+LL+S++EY+T VMR D A+++LP+IPKE VA FLE +G ++A+ V+TDP++RFELA+QLG L++A ++A E +SE KWKQL ELA+S + +A+ C+ A D +A ++KLA A+ GKNNVAF+ F+ GK++ CL+LL+ + R+PEAA +AR+YLPS+VS +V +WR++L KVN KAAESLADP EY NLF + A VE T PA+ Y ++E K Q Sbjct: 542 RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHAELWPAKQYPLVTPNEERNVMEEAKGFQ 843 The following BLAST results are available for this feature:
BLAST of DY305518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305518 ID=DY305518; Name=DY305518; organism=Citrus sinensis; type=EST; length=1253bpback to top |