EY679048
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.238e-45 Identity = 84/112 (75.00%), Postives = 97/112 (86.61%), Query Frame = 3 Query: 42 RLLAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 R++A VDE+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+Y S GLR YN DN ++G YIAPAFMDKLVVHITKNFM+LPN+K P LGI GG Sbjct: 55 RIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGG 166
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.058e-44 Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDY SQGLR YNLDN ++G YIAPAFMDKLVVHITKNF+SLPNIK P LGI GG Sbjct: 59 EISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGG 166
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.058e-44 Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDY SQGLR YNLDN ++G YIAPAFMDKLVVHITKNF+SLPNIK P LGI GG Sbjct: 59 EISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGG 166
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 3.511e-44 Identity = 86/108 (79.63%), Postives = 93/108 (86.11%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 E+DE KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIK P LGI GG Sbjct: 50 ELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGG 157
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 1.021e-43 Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 57 VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y SQGLR YNLDN ++G YIAPAFMDKLVVHITKNF++LPNIK P LGI GG Sbjct: 60 VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGG 166
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.742e-43 Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 3 Query: 18 KGPFLRASRLLAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 K +R E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+Y SQGLR Y+ DNT++GLYIAPAFMDKL+VH+ KNFM+LPNIK P LGI GG Sbjct: 35 KSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGG 154
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.129e-42 Identity = 89/132 (67.42%), Postives = 99/132 (75.00%), Query Frame = 3 Query: 33 RASRLLAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG*TTRKILP*ETCFR 419 ++ R++AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y SQGLR YNLDN ++G YIAPAFMDKLVVHITKNF+ LPNIK P LGI GG K E FR Sbjct: 53 KSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 3 Query: 54 EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDY SQG ++YN DN ++G YIA FMDKLVVH++KNFM+LPNIK P LGI GG Sbjct: 55 EVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGG 162
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.249e-41 Identity = 86/132 (65.15%), Postives = 97/132 (73.48%), Query Frame = 3 Query: 33 RASRLLAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG*TTRKILP*ETCFR 419 R+ R+ AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y SQGLR YN+DNT++G YIAP+FMDKLVVHITKNF+ LPNIK P LG+ GG K E FR Sbjct: 53 RSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFR 184
BLAST of EY679048 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.130e-41 Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 3 Query: 42 RLLAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYFSQGLRTYNLDNTINGLYIAPAFMDKLVVHITKNFMSLPNIKAPPYLGIRGG 377 +++AE DE KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+Y S GLR Y+ DN ++G YIAPAFMDKL VHI KNF++LPNIK P LG+ GG Sbjct: 52 KIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGG 163 The following BLAST results are available for this feature:
BLAST of EY679048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679048 ID=EY679048; Name=EY679048; organism=Citrus sinensis; type=EST; length=844bpback to top |