DY305484

Overview
NameDY305484
Unique NameDY305484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13643 contig Csv1_Contig13643:1..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.920e-74
Identity = 139/155 (89.68%), Postives = 148/155 (95.48%), Query Frame = 3
Query:    3 LARELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP 467
            LARE LRRGTEVVLVANSLPALND+TAMELPDIVA AAKHCDILRRAAE GGLLVDAM+N  DGSK++S S PLMVVENGCGSPCIDLRQVSSELAAAAK+ADL++LEGMGRALHTNFNA+F+CEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP
Sbjct:  713 LAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLLVDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEP 867          
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: Y2734_ARATH (Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.109e-24
Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 3
Query:    6 ARELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRY 461
            ARELLRRG +VVL AN LP++NDIT  EL +I+++            E G LL       +D SK       L++  +G   P IDL +VS ELA  + +ADL+I+EGMGR + TN  A+FKC++LK+ MVK+  +AE  + G +YDCV ++
Sbjct:  234 ARELLRRGAQVVLAANELPSINDITCTELTEILSQLKD---------ENGQLL------GVDTSK-------LLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAE-FLGGRLYDCVFKF 362          
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.465e-22
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 3
Query:    9 RELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 464
            RELL RGTEV+L  NS PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A  +CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  638 RELLLRGTEVILACNSGPALNDVT-------------HSESLIVAERIAGM--DPVVHSALREER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.465e-22
Identity = 62/154 (40.26%), Postives = 93/154 (60.39%), Query Frame = 3
Query:    9 RELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 464
            RELL RGTEV+L  NS PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A  +CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  638 RELLLRGTEVILACNSGPALNDVT-------------HSESLIVAERIAGM--DPVVHSALQEER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: PANK4_MACFA (Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 3
Query:    9 RELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 464
            RELL RGTEV+L  NS PALND+T             H + L  A    G+  D ++++    +       L++V+ G  SPC+DL ++   LAA  +   ADL+++EGMGRA+HTN++A   CE+LKLA++KN  LAE+L  G ++  + +YE
Sbjct:  638 RELLLRGTEVILACNSGPALNDVT-------------HGESLIVAERIAGM--DPVVHSALREER------LLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKLAVIKNAWLAERL-GGRLFSVIFKYE 769          
BLAST of DY305484 vs. ExPASy Swiss-Prot
Match: PANK4_RAT (Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.645e-20
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 3
Query:    9 RELLRRGTEVVLVANSLPALNDITAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSPSVPLMVVENGCGSPCIDLRQVSSELAAAAKN--ADLIILEGMGRALHTNFNARFKCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 464
            RELL RG EV+L  NS PALND+T  E   IVAE         R A    ++  A+       +E+     L++V+ G   PC+DL ++   LA   +   ADL+++EGMGRA+HTN++A  +CE+LKLA+VKN  LAE+L  G ++  + +YE
Sbjct:  638 RELLCRGIEVILACNSGPALNDVTYSESL-IVAE---------RIAAMDPIICTAL-------REDR----LLLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKLAVVKNAWLAERL-GGQLFSVIFKYE 769          
The following BLAST results are available for this feature:
BLAST of DY305484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PANK2_ARATH1.920e-7489.68Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
Y2734_ARATH3.109e-2444.08Uncharacterized protein At2g17340 OS=Arabidopsis t... [more]
PANK4_PONAB8.465e-2240.26Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_HUMAN8.465e-2240.26Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
PANK4_MACFA5.487e-2140.26Pantothenate kinase 4 OS=Macaca fascicularis GN=PA... [more]
PANK4_RAT4.645e-2041.56Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1AF09RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305484 ID=DY305484; Name=DY305484; organism=Citrus sinensis; type=EST; length=846bp
GCCTGGCAAGGGAACTACTAAGACGTGGAACTGAAGTTGTTTTGGTTGCA
AATTCCCTCCCTGCACTAAACGATATAACTGCCATGGAGCTCCCCGATAT
TGTAGCTGAGGCTGCAAAGCATTGTGACATTCTTCGTAGGGCTGCTGAGG
CAGGAGGTTTACTTGTGGATGCAATGATTAACACCCTAGATGGTTCTAAA
GAGAATTCACCTTCAGTTCCTCTGATGGTTGTTGAGAATGGCTGTGGAAG
CCCTTGCATAGACCTGAGGCAAGTCAGCTCTGAGCTAGCTGCTGCTGCAA
AAAATGCTGATCTGATTATTTTGGAAGGGATGGGTAGAGCTCTTCATACC
AACTTCAATGCTCGGTTTAAATGTGAGGCTTTGAAGCTTGCAATGGTGAA
GAATCAGAGGCTTGCAGAAAAATTGATCAAAGGGAACATATACGACTGTG
TTTGCAGATATGAGCCAGCCAGATAATCTTGCATTCAATTCAACTGTTTC
ATCTTGGGGCAGCAGATTAGATCAGAATTTGATGAGCAGGACAAATATAT
ACATCCACAGTCCACACCATTTGACAATGGTCCAGCAGTCTTTGTTTCAT
GTGATCTTGAAAAATAAATAAGAAATAATAAGGTGGAATAGGCCATAAAC
GATACAACAGTCACATAAGGTAGCAGCGGAGGACCACAAAACATGGAAGA
AGCAAAATTGATGACCAATTAATTGTATTTGGAGAAATGTATTTGTAGAT
ATTATGGATAAGTAAAAGGTTGTAATTTATTGTTGAATTGTTCATGTTTT
GTGTGAATTTATTTTTCTTTTTAATTCAACGAATTTAAATTAATGT
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