DY305480

Overview
NameDY305480
Unique NameDY305480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305480 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.784e-46
Identity = 103/208 (49.52%), Postives = 139/208 (66.83%), Query Frame = 1 
Query:    4 RTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSCLDPKPAKRPPMKYILKALENPFKVVRQE---XXXXXXXXXXXXXXXXXXXXXGSWRQSSSDVATL---AHTREGIG-----GLKQLGRVLS---HDSGGIEHSSSNKRSSNEIFPEP 585
            ++S+ S+SG + A C+YDVYCFGKVLLELVTGKLGIS  D+A  +E++E  LP+I+ ++KE++TKI+DPSL++DEDLLEEVWAMAI+A+SCL+PKP +RP M++I+ ALENP KVVR++                        GSWRQS+SDV  +   A T  G G     GL+  G   S   +++     SSS +R S+EI PEP
Sbjct:  698 QSSEPSSSGVTNAICSYDVYCFGKVLLELVTGKLGISSPDNALAKEYMEEALPYISTNEKELVTKILDPSLMVDEDLLEEVWAMAIIAKSCLNPKPTRRPLMRHIVNALENPLKVVREDTNSGSGSSRLRTNSSRGSWNAAIFGSWRQSASDVTAVQAGATTSGGGGGGGGNGLRNSGSQGSSGRNNNNNGNSSSSRRRQSSEIVPEP 905
The following BLAST results are available for this feature:
BLAST of DY305480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2165_ARATH3.784e-4649.52Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1AF03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305480 ID=DY305480; Name=DY305480; organism=Citrus sinensis; type=EST; length=1003bp
GGCAGAACCTCTGATGCAAGCAATTCAGGCTCCTCCGCGGCAACTTGTGC
CTATGATGTGTACTGCTTTGGAAAAGTCCTACTTGAGCTTGTAACTGGCA
AGCTTGGTATTAGCAAATCAGATGATGCTACTACACGAGAGTGGTTGGAA
CATACACTACCTCACATCACTTTACACGACAAGGAAATGTTGACCAAGAT
CATCGACCCATCTCTGATTCTAGATGAGGATCTACTGGAAGAAGTATGGG
CCATGGCAATTGTAGCCAGATCATGCCTTGACCCTAAGCCTGCCAAACGA
CCGCCAATGAAATATATTCTAAAAGCATTGGAAAACCCTTTTAAAGTGGT
GAGACAGGAGAGTTTCAGCTCTGCGAGGCTGCGAACAACTTCATCTAGGC
GATCTTGGAGTACTGCTTTCTTTGGTAGTTGGCGACAGAGCTCATCAGAT
GTTGCAACTTTAGCTCACACAAGAGAAGGTATCGGTGGTCTAAAACAGTT
GGGAAGAGTACTTTCTCACGATAGTGGCGGAATTGAGCACTCATCTTCGA
ATAAAAGGTCATCAAATGAAATATTCCCTGAACCGTTAGAAATGGAAGAT
ATGGAGAGGCAAGACGAACATTAGTTCGAAGTGTGCGCTTGTGATTATCT
TTAANTGATTTTGTGGCTTTCCCATCTGAGCGCCTGCTCGATAGCATTTC
TTGACCCCCGTTTTTTATATTTGCCTCATCACTGGGGTCCAAAACAATTT
TTTGAAAAAAAGTTGTTTGACCGCATAATGATGAAGATCCCGTTGGAACT
TATAATGTACCAGGCTAAAAAAAGGGTTGAAAAAACCAATCCTTGAAAAA
AATGAAACCAAAAAGGGTTTCCATTTTTTTAACCCTTCCTTTTTCGGTTT
TGGATTTTGATCATTTGTTAAACCAGCCTGCATTTTTTTATCTTGGATTG
AATATTTTCCTACCAAATTTCCCTGGATAAAATACGGAAGATTTTGAACC
GTG
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