DY305474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 4.643e-79 Identity = 156/262 (59.54%), Postives = 184/262 (70.23%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRA-GSAHRPGWETF*TGRAFKNLREGNFFPNGREKKPGV 1055 R+VWA NLESEF+LI +++ YPFISMDTEFPG++Y+ D+D R+ P+ Y +LKSNVDAL+LIQVGLTLSD+ GNLPDLG N ++IWEFNFRDFDV D HAPDSIELLR GIDFERNR EGV+S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILTRR LP L EFL +LR FFG H + GG RA G H+ G ++ T +AF+ +R+ F +G EK GV Sbjct: 15 RDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLD-----VLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVEDGAEKHAGV 271
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 1.764e-78 Identity = 158/262 (60.31%), Postives = 182/262 (69.47%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRA-GSAHRPGWETF*TGRAFKNLREGNFFPNGREKKPGV 1055 REVWA NLESEFELIS++ID YPFISMDTEFPG++++ D+ R P D Y +LK+NVDAL+LIQVGLTLSD +GNLPDLG + FIWEFNFRDFDVA DAHAPDSIELLR QGIDFERN +GV+S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILTRR LP L EF V+RV FG H + GG RA G H+ G ++ T AF+ +R+ F +G EK GV Sbjct: 20 REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDL--------RFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGPEKHAGV 273
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 1.315e-57 Identity = 126/262 (48.09%), Postives = 167/262 (63.74%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNFFPNGREKKPGV 1055 REVW NLESE LI +V+D +PF++MDTEFPG+V RP T + HY+ LK+NV+ L +IQ+GLT SD GNLP G+ +NK+ IW+FNFR+FD+ +D +A DSIELLR GIDF +N E G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP F ++ V+F + H + + GG +EL R G H+ G ++ T F+ L+E NFF EK GV Sbjct: 13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY-------HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT--DNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVY-DIKHLMKFCNSLHGGLNKLAEL-LDVERVGICHQAGSDSLLTSCTFRKLQE-NFFIGSMEKYSGV 262
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.777e-54 Identity = 123/262 (46.95%), Postives = 167/262 (63.74%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKF-IWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNFFPNGREKKPGV 1055 REVW NL EF LI +++D++ +I+MDTEFPG+V +P +T Y +Y+ LK NVD L LIQVGLT SD +GNLP G+ +KF IW+FNFR+F++ D +A +SIELLR GIDF++N E+G+D VRF ELMMSSG+V N+++SWVTFH YDFGYLVK+LT + LP +F +L V+F T H + + GG +EL R G H+ G ++ T +F+ L+E +FP EK GV Sbjct: 13 REVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKP---VATFKYNNDL----NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT---DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFP-TVYDIKHLMTFCNGLFGGLNRLAEL-MGVERVGICHQAGSDSLLTLGSFRKLKE-RYFPGSTEKYTGV 261
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.504e-53 Identity = 118/262 (45.04%), Postives = 161/262 (61.45%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNFFPNGREKKPGV 1055 REVW NL+ E +LI V+D +P+++MDTEFPG+V RP S Y HY+ LK+NV+ L +IQ+GLT S+ GNLP G+ + IW+FNFR+FD+ +D A DSIELL+ GID +N +G+DS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT ++LP +F ++ V+F T H + + GG +EL R G H+ G ++ T F+ L+E NFF K GV Sbjct: 13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY--------HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT--DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFP-TVYDIKHLMKFCNSLHGGLNKLAELLE-VERVGICHQAGSDSLLTSCTFRKLKE-NFFVGPLHKYSGV 261
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 6.987e-51 Identity = 114/255 (44.71%), Postives = 155/255 (60.78%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNFFPNG 1034 REVW NLE E LI Q ID +P+++MDTEFPG+V + +P+ PY + + Y LK+NV+ L LIQ+GLTLSD GNLP G+ N + IW+FNFR+F+V +D A DSIELLR ID E+N E GVD+ RFAEL+M SG+V N+ + WVTFH YDFGYL+K+L+ + LP + +F + FF + ++L G LG R G +H+ G ++ T R F ++E FF G Sbjct: 17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN--YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT--NKQCIWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLG--VKRVGISHQAGSDSLLTLRTFIKMKE--FFFTG 263
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 5.729e-45 Identity = 103/251 (41.04%), Postives = 146/251 (58.17%), Query Frame = 3 Query: 273 REVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRP-DVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLREGNF 1022 R+VW++NL+ E LI +I+RYP +SMDTEFPG+V RP V S+ Y HY+ L++NVD+L +IQ+GL LSD GN P W+FNF F++ D +AP+SIELL GIDF++++E G++ FAEL++ SGLV E V+W+TFHS YDF YL+K +T+ LP+ +EF +L ++F + Y + S L G R G H+ G + T R F +R F Sbjct: 23 RDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDY--------HYQTLRANVDSLKIIQIGLALSDEEGNAPV------EACTWQFNFT-FNLQDDMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIYFPKNY--DIKYIMKSVLNNSKGLQDIADDLQIHRIGPQHQAGSDALLTARIFFEIRSRYF 256
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.661e-42 Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 2.661e-42 Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243
BLAST of DY305474 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.661e-42 Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 3 Query: 276 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDH-YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDVATDAHAPDSIELLRLQGIDFERNREEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTVLRVFFGYTFMTSTHYAVLSDLVRGGGTSGSELGR*PGRAGSAHRPGWETF*TGRAFKNLRE 1013 EVWA NL+ E + I QVI +Y +++MDTEFPG+V RP R +D+ Y++L+ NVD L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+++ EEG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KILT +LP +F +LR+FF + Y + S GG R G H+ G ++ TG AF +RE Sbjct: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVV--------ARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS------TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIY--DVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 243 The following BLAST results are available for this feature:
BLAST of DY305474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305474 ID=DY305474; Name=DY305474; organism=Citrus sinensis; type=EST; length=1266bpback to top |