EY702512

Overview
NameEY702512
Unique NameEY702512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6295 contig Csv1_Contig6295:295..1194. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_CITSI (ATP synthase subunit a, chloroplastic OS=Citrus sinensis GN=atpI PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.130e-58
Identity = 116/135 (85.93%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_MANES (ATP synthase subunit a, chloroplastic OS=Manihot esculenta GN=atpI PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.811e-57
Identity = 115/135 (85.19%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  115 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 249
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_POPTR (ATP synthase subunit a, chloroplastic OS=Populus trichocarpa GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 115/135 (85.19%), Postives = 115/135 (85.19%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTSIAYFYAGLSKKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_POPAL (ATP synthase subunit a, chloroplastic OS=Populus alba GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 115/135 (85.19%), Postives = 115/135 (85.19%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKIIELPHGELAAPTNDINTT ALALLTSIAYFYAGLSKKGLGYF KYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKIIELPHGELAAPTNDINTTVALALLTSIAYFYAGLSKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OENPA (ATP synthase subunit a, chloroplastic OS=Oenothera parviflora GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK++ELPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OENGL (ATP synthase subunit a, chloroplastic OS=Oenothera glazioviana GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK++ELPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OENEH (ATP synthase subunit a, chloroplastic OS=Oenothera elata subsp. hookeri GN=atpI PE=3 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK++ELPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OENBI (ATP synthase subunit a, chloroplastic OS=Oenothera biennis GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK++ELPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_OENAR (ATP synthase subunit a, chloroplastic OS=Oenothera argillicola GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 113/135 (83.70%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWK++ELPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  113 ALLPWKLVELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 247
[Close]
BLAST of EY702512 vs. ExPASy Swiss-Prot
Match: ATPI_GOSHI (ATP synthase subunit a, chloroplastic OS=Gossypium hirsutum GN=atpI PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 114/135 (84.44%), Postives = 116/135 (85.93%), Query Frame = 3 
Query:   12 ALLPWKIIELPHGELAAPTNDINTTGALALLTSIAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADEXXXXXXXXXXXXXXXXXXMFLGLFTSGIQALIFATLAAAYIGESMEGHH 416
            ALLPWKII+LPHGELAAPTNDINTT ALALLTS+AYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADE                  MFLGLFTSGIQALIFATLAAAYIGESMEGHH
Sbjct:  110 ALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPSVVPIPVMFLGLFTSGIQALIFATLAAAYIGESMEGHH 244
The following BLAST results are available for this feature:
BLAST of EY702512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
ATPI_CITSI8.130e-5885.93ATP synthase subunit a, chloroplastic OS=Citrus si... [more]
ATPI_MANES1.811e-5785.19ATP synthase subunit a, chloroplastic OS=Manihot e... [more]
ATPI_POPTR2.366e-5785.19ATP synthase subunit a, chloroplastic OS=Populus t... [more]
ATPI_POPAL2.366e-5785.19ATP synthase subunit a, chloroplastic OS=Populus a... [more]
ATPI_OENPA2.366e-5783.70ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENGL2.366e-5783.70ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENEH2.366e-5783.70ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENBI2.366e-5783.70ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_OENAR2.366e-5783.70ATP synthase subunit a, chloroplastic OS=Oenothera... [more]
ATPI_GOSHI2.366e-5784.44ATP synthase subunit a, chloroplastic OS=Gossypium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-H03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702512 ID=EY702512; Name=EY702512; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGCTCTTTTACCTTGGAAAATCATAGAGTTACCTCATGGG
GAGTTAGCCGCACCCACGAATGATATAAATACTACCGGTGCTTTAGCTTT
GCTCACGTCAATAGCATACTTCTATGCGGGTCTTTCCAAAAAGGGATTAG
GCTATTTCAGTAAATACATTCAACCGACTCCAATTCTTTTACCCATTAAC
ATTTTAGAAGATTTCACAAAACCTCTATCACTTAGTTTTCGACTTTTTGG
GAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTAC
CTTTAGTGGGTCCTATACCCGTCATGTTCCTTGGATTATTTACAAGCGGT
ATTCAAGCTCTTATTTTTGCAACTTTAGCTGCGGCTTATATAGGCGAATC
TATGGAGGGACATCATTGACTCGTTTTCGAAATAGTCTTTTTTTGTAGCT
TAGAACAAAGGCAATGGATGCGTAACTCAAGATAATCTACTTATACTTCT
ACTTAGGAAAAATACATATCCAAACATAAATCTACAAATACCGCATATAC
GATCAAGAGTCGTAGAAAAAAATTACGATATTGGGGGACTGTANGGAAGA
GATCTAAAGGGATCTTTTTCCTCAAATCCCTCTTTGGCCCTATATATCAT
CCCCCCCTCTCCCCGCCAATAAAATTGTCCTAATATGGGTTGGGCCATTC
TGGGGCATTCAATTCCAATAGGCAAATACCAGAGGGAGTAGGTGGATAAA
AATCCCTATAGTATCCCAGGGGGGGGGATTAACAAAAAGGAAAAAAGGTG
GTTTATAAAAAAATCCCCCTTTAGTGGATTTAGGCCATTCCTCATTCTAC
CGTGGGCCAAAGGGAAATTTATTATATAATGGGTTGGGCGGACCTCAAT
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