DY257565

Overview
NameDY257565
Unique NameDY257565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1033
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.604e-23
Identity = 67/200 (33.50%), Postives = 99/200 (49.50%), Query Frame = 2
Query:  197 LLHLFLATIPTTSHVFTMDIPHLIRLLQAMVRSRKFDFPRLSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYMLGHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTGEAXXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGT-EAKFKACLNSTLWEKLLLQG 793
            LL + + T    SHVF    P +I   +  +R        L C  WR + +TN+   W T P +CA YV  YM+G   ++  D V+ EA  +A S+ L DD +D+W+FD++E  L NLPYY+   +G++ ++   F +WV  G A                G  +  LTGR E  R+ T E    A  +   W KL+L+G
Sbjct:    9 LLTVAIGTENLNSHVFPR--PLIIEYPEKQLRDE------LKCTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHD--WHKLILRG 198          
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.712e-18
Identity = 53/160 (33.12%), Postives = 78/160 (48.75%), Query Frame = 2
Query:  311 PRLSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYMLGHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTGEAXXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGTEAKFKACLNSTLWEKLLLQ 790
            P + C  WRL  + ++   + T P +C      Y+ G   R +S  V  +A  +A  L +    KD +VF I+   L N+PYY   G+GV+ +N T++ EWVN G A                G  I+FL+GR   ++  TEA  K     T WEKL+L+
Sbjct:   38 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP--KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHT-WEKLILK 194          
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 7.712e-18
Identity = 53/160 (33.12%), Postives = 78/160 (48.75%), Query Frame = 2
Query:  311 PRLSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYMLGHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTGEAXXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGTEAKFKACLNSTLWEKLLLQ 790
            P + C  WRL  + ++   + T P +C      Y+ G   R +S  V  +A  +A  L +    KD +VF I+   L N+PYY   G+GV+ +N T++ EWVN G A                G  I+FL+GR   ++  TEA  K     T WEKL+L+
Sbjct:   35 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEVHP--KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHT-WEKLILK 191          
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.678e-15
Identity = 58/214 (27.10%), Postives = 101/214 (47.20%), Query Frame = 2
Query:  185 LSMDLLHLFLATIPTTSHV-FTMDIPHLIRLLQA---------MVRSRKFDFPRLSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYML-GHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTGEA-XXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGTEAKFKACLNSTLWEKLLLQ 790
            LS+ LL L  AT+   SHV  +  +P LI LL++         ++          +C  W L  +T++ I + T P  C  YV +Y++     + +S  V  EA  +A  L L +D  ++W+FD+++  L ++PYYA  G+G +   P  ++ W+ +GE+                 GI  + ++ R +     T    KA +  T W+ L+L+
Sbjct:    4 LSLSLLLLLAATV---SHVQSSASVPGLIELLESNTIFGNEAELLEKEGLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKA-VGVTKWKHLILK 213          
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.110e-15
Identity = 56/213 (26.29%), Postives = 98/213 (46.01%), Query Frame = 2
Query:  185 LSMDLLHLFLATIPTTSHVFTMDIPHLIRLLQA---------MVRSRKFDFPRLSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYML-GHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTG-EAXXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGTEAKFKACLNSTLWEKLLLQ 790
            LS+ LL L  AT+  +       +P LI L+ +         ++   K      +C  W L  +T++ I + T P  C  YV +Y++     + +S  V  EA  +A  L L +D  ++W+FD+++  L ++PYYA  G+G +  +P  ++ W+ TG                   GI  + L+ R +  +N T    +A    T W+ L+L+
Sbjct:    4 LSLSLLLLLAATVSAS-------VPGLIELVDSKTIFGNVAELLEKEKLSINYANCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAA-GVTYWKHLILK 208          
BLAST of DY257565 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.322e-14
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 2
Query:  317 LSCLRWRLLPKTNHFIRWATAPYKCAYYVGNYMLGHHNRLNSDVVAIEAILHAHSLTLADDRKDIWVFDINEPSLCNLPYYASTGFGVKPYNPTMFYEWVNTGEAXXXXXXXXXXXXXXXXGINIVFLTGRPEHQRNGTEAKFKACLNSTLWEKLLLQ 790
            + C  +RL  + ++   + T P +C     +Y+ G   R +S  V  +A  +A    +     DI++F I+   L N+PYY   G+GV+ +N T++ EWVN G+A                G  IVFL+GR   +   TEA  K     T WE+L+L+
Sbjct:   41 VKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREV--HHNDIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHT-WEQLILK 195          
The following BLAST results are available for this feature:
BLAST of DY257565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA1_SOLLC1.604e-2333.50Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1... [more]
VSPA_SOYBN7.712e-1833.13Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE... [more]
S25K_SOYBN7.712e-1833.13Stem 31 kDa glycoprotein (Fragment) OS=Glycine max... [more]
VSP1_ARATH4.678e-1527.10Vegetative storage protein 1 OS=Arabidopsis thalia... [more]
VSP2_ARATH6.110e-1526.29Vegetative storage protein 2 OS=Arabidopsis thalia... [more]
VSPB_SOYBN2.322e-1431.01Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3AH05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257565 ID=DY257565; Name=DY257565; organism=Citrus sinensis; type=EST; length=1033bp
GTTCATGCTCTGTCTTCCATCAAAACAAGATTGATGTTGTATTGTAGCTT
GCTTGTGTTGACATTGATCTTGTAAGATCAGTGGTTTATGACTTACTGTT
CTCGGGTGCACGCATTTGTGTTACCGTGTGTCACTGCCAGTATTGTTCAA
TTTACTGGTTGCTCTATCAGCAACGTCCCATGGACTAAGCATGGACCTCC
TGCATCTTTTTCTGGCTACCATACCAACAACATCCCATGTATTTACCATG
GACATCCCCCATCTTATTCGTCTTCTCCAAGCCATGGTCCGTTCCCGGAA
ATTCGATTTTCCCCGCTTGTCATGCCTGAGATGGCGACTCTTACCGAAAA
CTAATCATTTTATAAGATGGGCGACTGCTCCCTACAAATGTGCATACTAC
GTGGGGAATTACATGTTAGGCCATCATAACCGCCTGAACTCTGATGTGGT
TGCTATTGAGGCCATTCTCCATGCTCATAGCCTCACGCTTGCTGACGACC
GGAAGGACATTTGGGTTTTCGACATAAATGAACCCTCGCTATGTAATTTG
CCATATTATGCTAGCACTGGATTCGGGGTGAAGCCGTACAACCCTACTAT
GTTCTATGAATGGGTTAACACCGGAGAAGCTCCCCCGCTGCCACAGAGCC
TTAAGCTTTACAAAAAATTATTATTGCTTGGAATTAATATTGTATTCCTC
ACGGGAAGACCAGAACATCAAAGAAATGGTACAGAAGCTAAATTTAAAGC
ATGCTTGAATTCAACACTTTGGGAAAAGCTCCTCCTTCAAGGGATCATCC
TCCTTCAGGAAAAACCACCATGGGGTGTACAAATCAAAGGGAAAGAAAAG
AATCCCTGAGAAAAAAAGGGTTCCAGAATTTATTGGGAAAACTTAGGGGG
ATCAATTGGAACGCGACTCCCCTGGGGCCCCCAACGCCCCCCCCTCCGGA
CCGTTTCAGGCTTGCCCGGACCCCCATGGATTTAACATTGGGTCTAATTA
TATAAAAATACAGGGTTAACCTGTGGAAATTTT
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