DY257514

Overview
NameDY257514
Unique NameDY257514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1162
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY257514 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.099e-14
Identity = 57/161 (35.40%), Postives = 76/161 (47.20%), Query Frame = 1 
Query:    1 VLCRIYKKHSGSQKP-VSATSVXXXXXXXXXXXXXXXXHLDDVLESLPEIDDRFFALPRMNSLKTLQQEDNKVNNLQHLGSGNFDWASLAGLHSVPEFVSAAXXXXXXXSHGVACYANNDFYVPSMPQMCHVNSGRVGNSVEEEVQSGLRNQRVDNSGLFQ 480
            VLCRIYKK SGSQ+  V+                     LDDVL+S PEI D+ F LPRMNSL+T+              +GNFDWASLAGL+ +PE            ++G+  Y   D +                 + E E +SG  N++ ++SGL Q
Sbjct:  155 VLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQLDDVLDSFPEIKDQSFNLPRMNSLRTIL-------------NGNFDWASLAGLNPIPELA---------PTNGLPSYGGYDAF----------------RAAEGEAESGHVNRQQNSSGLTQ 277
The following BLAST results are available for this feature:
BLAST of DY257514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC72_ARATH2.099e-1435.40NAC domain-containing protein 72 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2DG12FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257514 ID=DY257514; Name=DY257514; organism=Citrus sinensis; type=EST; length=1162bp
GTTTTGTGCAGAATCTATAAGAAGCATTCAGGTTCCCAAAAACCAGTGTC
AGCAACAAGTGTTTCTTCAAGCAAAGAACACAGTAATGGTTCTTGTTCAT
CTTCATCTTCTCATCTTGATGATGTGCTCGAGTCTTTACCTGAAATTGAT
GACCGATTTTTCGCTTTGCCACGCATGAACTCACTCAAGACTTTACAGCA
AGAAGACAACAAGGTTAACAATTTGCAGCATCTGGGGTCGGGTAATTTTG
ACTGGGCGAGTCTTGCGGGTCTTCATTCGGTCCCCGAATTCGTCTCCGCT
GCACAGACACAGACGACGACTCAGAGTCATGGGGTGGCCTGTTATGCGAA
CAATGACTTTTATGTCCCCTCGATGCCCCAAATGTGCCACGTAAATTCCG
GAAGGGTGGGCAACTCGGTGGAAGAGGAGGTTCAGAGTGGGCTTAGGAAT
CAACGGGTTGATAACTCGGGGCTCTTTCAGCATAATTCGGCCGTATTGAC
CCAACCGAACTTCTGTAGCCTGGTTGACCCGTATGGATTAAGGCACCCGA
CCCAATCAAGCGGGTTTGGGTTTAGACATTGAAATATGGGTAAAATGCCC
GCGCATTTGAAATGATGCATGATATTATGAAGAAAGGATAAGTGATTGAC
AAATTGTAAACTCTAGAGGTCTCGCGTTCGAATCTCCTCGAGCATCGAAA
TGTTGACAAAAGTGTGATCTTGAGTCGGGAGGGATTTTTAACAAAAAATG
GAAGTATGGGGGCAGTTGTCTAAATATTGGAATTCTTTGGGCTGACTTTT
TGGCTTCCGGGTTCAAAATAGGGAAAGTAAGGGGGGGTTTTGTAATACCC
GAAGGGCAAAAATGGATTGCTCCTTTTTTGCTGGGTAAGGTGCCCAAAAA
AAAAAAATTAAAAAAAAATGTAAAAAGCCCAATTTATTGGACAATTTAAA
TTTCCAATTTTAATTCAGGAAGCCACCGCCAAGTAAATTAAGGGTTGGGG
GGGGATTTCCCCCCATTTTCGGGGTTATAATTTACAGGCCCCCAATTATC
GGTGGAAAGGGGTTTCCTTTTTTTCCCTCTCTGGTAAAACACAAAATTTT
AGGTTTTGTGAATTTTGAAATTTAAAAAAAGGGGAAAAAATTCCCCTTTG
GGGGGTGGGAAT
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