DY257474

Overview
NameDY257474
Unique NameDY257474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1281
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6614 contig Csv1_Contig6614:1..1281. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY257474 vs. ExPASy Swiss-Prot
Match: GRP2_NICSY (Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.299e-14
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 2 
Query:   65 ERGTGKVTRTSDQKGVGFLTPDDGGEDVFVHQSAIRVEGFRSLGERDEVEFVIES 229
            +R  G V   SDQKG GF+TPDDGGED+FVHQS IR EGFRSL E + VEF +ES
Sbjct:    7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVES 61

HSP 2 Score: 21.9422 bits (45), Expect = 2.299e-14
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 3 
Query:  243 TKAADGTGPNGKPAQ 287
            TKA D TGP+G   Q
Sbjct:   67 TKAVDVTGPDGAAVQ 81
The following BLAST results are available for this feature:
BLAST of DY257474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GRP2_NICSY2.299e-1467.27Glycine-rich protein 2 OS=Nicotiana sylvestris GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2CH11FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257474 ID=DY257474; Name=DY257474; organism=Citrus sinensis; type=EST; length=1281bp
CCAGTCTCTCATTTTTGGCTCTCTAGGGAAAGGGTCTTTCTTTTCGTTAT
CACACATGAGATCCGAACGAGGTACAGGCAAGGTCACTCGGACCAGCGAC
CAAAAGGGGGTCGGCTTCCTCACCCCAGATGACGGGGGCGAGGACGTGTT
CGTCCACCAGTCGGCGATCCGCGTCGAGGGCTTCCGCAGCCTCGGCGAAA
GAGACGAGGTTGAGTTCGTGATCGAATCTGAGGCGCTCCCGCACAAAGGC
CGCTGACGGTACCGGTCCCAACGGAAAACCAGCTCAGGGCGGCCCCCGCG
GAGACGGACGCGGAGGCGAACGCGGAACAAGCGGCGGAGGTCGAGGAGGA
GGTGGTTACAGGGGAGGGAGAGGTGGCGGTGGTTATGGAGGCCGCGGTTA
CGGTGGACGACATGGATGCCAAGGATGGGGGCCCCAGGATAGACGACATA
ACCAGCACCCGCTTAATGGTCACCATCATTCTGCTGAGGGTTACTGCTTT
CATAACTGTGGCTGTGACTTACTGCCCGCCTTGCTGCTGAGGAACGAGAC
AGGCGGCGGAGGCACTTTCTTTGGGGTGGAACGACTGGTGCCTTTCATCT
GACCGTGCTTGCTTGTACTACGACTATGTTCGATAAGACACGCCAGGTTT
AATAGAAACTCCATCTTTCATTGAGGACATGGCTTGCCTCCGTTATGGCT
GCGCAAAAAAGGCGCGAGCACGTGGGTTTCCCGTGGCAAAAGGCGTCCTT
GATCAACAAAATAGAAAGGCGAAGCAAATAGGGAAGAAATGGTTCGGTTC
TATTCTCGGGCGTTGGAGAGGGTCCACCGGCTTCGCCCACCTTCCGTGGC
CGTGCTCGCCGCCGGCATACGCAAAGGCAACGATAGAGAATCCTTTCCAA
AATCTTCTCTGGTCAAAGGATCACATGGTGGCCTTCCCTCTACAGATAGA
CCCCTGCGGCTCTACTAGCCACCCTCCCCCACAGTCTCATTCTCCACATT
GTCCACCCCACGCATCCCGAACGCGCTCAAGTACTGGCGCGTGCATGGCC
GAGCGCCGTTACTTCCCTGACCTACTCAACGGCAACCACCAAGGCGCCAC
CTAACTACCCCTCAAGGACACTTCCCCTGGCGCCGCGGACCGACCACCAC
CAGATCACCCGGCCCAACCCATCTCCTGTACCTATACAGCAAGTACAACC
GACTTCATCACATCCACCACTCGCCTCCTCAGCCACAACCCAACCATAAC
AACTCTCCCGTCATTAACATAAAACCCACCC
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