DY257447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 8.976e-100 Identity = 181/215 (84.19%), Postives = 196/215 (91.16%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP*FLEGDSFWEISIQKEHRSF 831 KWVPVTKLGRLV+EGKI +EQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD++GHVGLGVKCSKEVATAIRGAIILAKLSV+P+RRGYWGNKIG+PHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF+ L KTYGFL P F + F + S +EH F Sbjct: 44 KWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK-SPYQEHTDF 257
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2) HSP 1 Score: 360.147 bits (923), Expect = 1.296e-98 Identity = 182/225 (80.89%), Postives = 194/225 (86.22%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP*FLEGDSFWEISIQKEHRSFDAKPLQQGRP 861 KWVPVTKLGRLV G I+ +EQIYLHSLP+KEYQIID LIG LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF+ L KTYGFL P F + F Q+ +K L +P Sbjct: 53 KWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKALSTSKP 277
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 3.771e-98 Identity = 182/215 (84.65%), Postives = 192/215 (89.30%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP*FLEGDSFWEISIQKEHRSF 831 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF+ L KTYGFL P F + F S +EH F Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRF-SRSPYQEHTDF 265
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2) HSP 1 Score: 358.607 bits (919), Expect = 3.771e-98 Identity = 182/215 (84.65%), Postives = 192/215 (89.30%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP*FLEGDSFWEISIQKEHRSF 831 KWVPVTKLGRLV + KI LEQIYLHSLP+KEYQIID L+G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF+ L KTYGFL P F + F S +EH F Sbjct: 52 KWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRF-SRSPYQEHTDF 265
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2) HSP 1 Score: 323.553 bits (828), Expect = 7.724e-91 Identity = 153/195 (78.46%), Postives = 177/195 (90.77%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +WVPVTKLGRLVREGKI+SLE+IYL+SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GH+GLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSV+VR++PAPRG GIV+A VPKK+L AGI+D +TS+RGST TLGNF KAT+ + KTY +L P Sbjct: 42 EWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTP 236 HSP 2 Score: 33.4982 bits (75), Expect = 7.724e-91 Identity = 15/30 (50.00%), Postives = 19/30 (63.33%), Query Frame = 2 Query: 758 ASLTPDFWKETRFGKSPYKKNTDLLT-PNP 844 A LTPD WKE G +PY+ +D L+ P P Sbjct: 232 AYLTPDLWKEMPLGSTPYQAYSDFLSKPTP 261
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.438e-89 Identity = 151/195 (77.44%), Postives = 174/195 (89.23%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +WVPVTKLGRLV++ KI+SLE+IYL+SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS+IPVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +L P Sbjct: 44 EWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 238 HSP 2 Score: 37.3502 bits (85), Expect = 1.438e-89 Identity = 18/41 (43.90%), Postives = 23/41 (56.10%), Query Frame = 2 Query: 764 LTPDFWKETRFGKSPYKKNTDLLTPNPSNKGVHPEVESSEP 886 LTPD WKET F KSPY++ TD L + V + +P Sbjct: 236 LTPDLWKETVFTKSPYQEFTDHLAKTHTRVSVQRTQAAVQP 276
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 9.238e-89 Identity = 149/195 (76.41%), Postives = 173/195 (88.72%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +L P Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 253 HSP 2 Score: 36.5798 bits (83), Expect = 9.238e-89 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 764 LTPDFWKETRFGKSPYKKNTDLL 832 LTPD WKET F KSPY++ TD L Sbjct: 251 LTPDLWKETVFTKSPYQEFTDHL 273
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3) HSP 1 Score: 313.538 bits (802), Expect = 9.238e-89 Identity = 149/195 (76.41%), Postives = 173/195 (88.72%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +L P Sbjct: 59 EWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 253 HSP 2 Score: 36.5798 bits (83), Expect = 9.238e-89 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 764 LTPDFWKETRFGKSPYKKNTDLL 832 LTPD WKET F KSPY++ TD L Sbjct: 251 LTPDLWKETVFTKSPYQEFTDHL 273
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_URECA (40S ribosomal protein S2 OS=Urechis caupo GN=RPS2 PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 9.242e-89 Identity = 149/195 (76.41%), Postives = 172/195 (88.21%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +WVPVTKLGRLV++ KI++LE+IYL SLPIKE++IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCKVTGKCGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KAT+ + TY +L P Sbjct: 45 EWVPVTKLGRLVKDMKIKTLEEIYLFSLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTP 239 HSP 2 Score: 38.1206 bits (87), Expect = 9.242e-89 Identity = 19/39 (48.72%), Postives = 23/39 (58.97%), Query Frame = 2 Query: 764 LTPDFWKETRFGKSPYKKNTDLLTPNPSNKGV--HPEVE 874 LTPD W+ET F KSPY++ TD L + V HP E Sbjct: 237 LTPDLWRETVFTKSPYQEYTDYLAKHHGRGAVTAHPTEE 275
BLAST of DY257447 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2) HSP 1 Score: 312.768 bits (800), Expect = 1.572e-88 Identity = 149/195 (76.41%), Postives = 173/195 (88.72%), Query Frame = 1 Query: 187 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFEWLLKTYGFLNP 771 +W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +L P Sbjct: 59 EWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTP 253 HSP 2 Score: 36.5798 bits (83), Expect = 1.572e-88 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 764 LTPDFWKETRFGKSPYKKNTDLL 832 LTPD WKET F KSPY++ TD L Sbjct: 251 LTPDLWKETVFTKSPYQEFTDHL 273 The following BLAST results are available for this feature:
BLAST of DY257447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 446
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257447 ID=DY257447; Name=DY257447; organism=Citrus sinensis; type=EST; length=1111bpback to top |