DY257440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 5.988e-98 Identity = 169/220 (76.82%), Postives = 193/220 (87.73%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 +DK+W+PVTKLGRLVK+ KIK++EEIYLYS PIKE +I+D + + LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLS+IPVRRGYWG+ +G PHTVPCKVTGRCGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KATF AI TY +LTPDLW++ F +SPYQEF D LAK Sbjct: 41 EDKEWVPVTKLGRLVKDMKIKSLEEIYLYSLPIKESEIIDFFLGSALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLAK 260
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_URECA (40S ribosomal protein S2 OS=Urechis caupo GN=RPS2 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 1.021e-97 Identity = 167/221 (75.57%), Postives = 193/221 (87.33%), Query Frame = 1 Query: 163 EDDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 + DK+W+PVTKLGRLVK+ KIKT+EEIYL+S PIKE++I+D + LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG+ +G PHTVPCKVTG+CGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KAT+AAI TY +LTPDLW + F +SPYQE+ D LAK Sbjct: 41 DGDKEWVPVTKLGRLVKDMKIKTLEEIYLFSLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKSPYQEYTDYLAK 261
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 5.069e-97 Identity = 167/220 (75.91%), Postives = 192/220 (87.27%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 +DK+WIPVTKLGRLVK+ KIK++EEIYL+S PIKE +I+D + +LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG+ +G PHTVPCKVTGRCGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KATF AI TY +LTPDLW++ F +SPYQEF D L K Sbjct: 56 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3) HSP 1 Score: 355.14 bits (910), Expect = 5.069e-97 Identity = 167/220 (75.91%), Postives = 192/220 (87.27%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 +DK+WIPVTKLGRLVK+ KIK++EEIYL+S PIKE +I+D + +LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG+ +G PHTVPCKVTGRCGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KATF AI TY +LTPDLW++ F +SPYQEF D L K Sbjct: 56 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 8.647e-97 Identity = 164/221 (74.21%), Postives = 194/221 (87.78%), Query Frame = 1 Query: 163 EDDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 ED K+W+PVTKLGRLV+E KIK++EEIYLYS PIKE++I+D + ++LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD+NGH+GLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG+ +G PHTVPCKVTG+CGSV RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RGST TLGNF KAT+AAI TY +LTPDLW++ +PYQ + D L+K Sbjct: 38 EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLSK 258
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 8.647e-97 Identity = 166/220 (75.45%), Postives = 192/220 (87.27%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 +DK+W+PVTKLGRLVK+ KIK++EEIYL+S PIKE +I+D + +LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG+ +G PHTVPCKVTGRCGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KATF AI TY +LTPDLW++ F +SPYQEF D L K Sbjct: 56 EDKEWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2) HSP 1 Score: 353.984 bits (907), Expect = 1.129e-96 Identity = 166/220 (75.45%), Postives = 192/220 (87.27%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAK 825 +DK+W+PVTKLGRLVK+ KIK++EEIYL+S PIKE +I+D + +LKDEV+KIMPVQKQTRAGQRTRFKAFV IGD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWG+ +G PHTVPCKVTGRCGSV+ RL+PAPRGTGIV+AP PKKLL +AGI DCYT++RG T TLGNF KATF AI TY +LTPDLW++ F +SPYQEF D L K Sbjct: 56 EDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS24_ARATH (40S ribosomal protein S2-4 OS=Arabidopsis thaliana GN=RPS2D PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 4.745e-95 Identity = 163/222 (73.42%), Postives = 192/222 (86.49%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAKAP 831 ++++W+PVTKLGRLVKE KI IE+IYL+S P+KEYQI+D L+ +LKDEVMKIMPVQKQTRAGQRTRFKAF+V+GDSNGHVGLGVKCSKEVATAIRGAIILAKLSV+P+RRGYWG+ +G PHTVPCKVTG+CGSV R+VPAPRG+GIVAA PKK+LQ AGI D +T+SRGST+TLGNFVKATF + TYGFLTP+ W++ F +SPYQE D L P Sbjct: 41 EEEKWVPVTKLGRLVKEGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPYQEHTDFLLIPP 262
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2) HSP 1 Score: 346.28 bits (887), Expect = 2.355e-94 Identity = 164/219 (74.89%), Postives = 189/219 (86.30%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLA 822 ++++W+PVTKLGRLV IK IE+IYL+S P+KEYQI+D LI TLKDEVMKIMPVQKQTRAGQRTRFKAFVV+GD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG+ +G PHTVPCKVTG+CGSV R+VPAPRG+GIVAA PKK+LQ AGI D +T+SRGST+TLGNFVKATF + TYGFLTP+ W++ F +SPYQE D LA Sbjct: 50 EEEKWVPVTKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLA 268
BLAST of DY257440 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 2.355e-94 Identity = 163/229 (71.18%), Postives = 193/229 (84.28%), Query Frame = 1 Query: 166 DDKQWIPVTKLGRLVKESKIKTIEEIYLYSFPIKEYQIVDRLISTTLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGSSLGDPHTVPCKVTGRCGSVICRLVPAPRGTGIVAAPTPKKLLQLAGITDCYTTSRGSTRTLGNFVKATFAAIGNTYGFLTPDLWEDNDFKQSPYQEFIDLLAKAPEQRKKLI 852 ++ +W+PVTKLGRLV ++KI +E+IYL+S P+KEYQI+D L+ TLKDEVMKIMPVQKQTRAGQRTRFKAFVV+GD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWG+ +G PHTVPCKVTG+CGSV R+VPAPRG+GIVAA PKK+LQ AGI D +T+SRGST+TLGNFVKATF + TYGFLTP+ W++ F +SPYQE D L+ K+I Sbjct: 49 EETKWVPVTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVSATKVI 277 The following BLAST results are available for this feature:
BLAST of DY257440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257440 ID=DY257440; Name=DY257440; organism=Citrus sinensis; type=EST; length=1289bpback to top |