DY257437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP2_HUMAN (Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 4.744e-39 Identity = 84/217 (38.71%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 117 ELSTRLDDITEDNPLTLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQP-VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLLHFPDPLKKVEKLESL 761 EL ++DIT LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+ ++ +YM FEV+EP WH++ L++A +ID+V+ HH F CL++C+L P+ LK KL S+ Sbjct: 538 ELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPELLKVFSKLMSV 754
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP2_PONAB (Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.355e-38 Identity = 83/217 (38.25%), Postives = 133/217 (61.29%), Query Frame = 3 Query: 117 ELSTRLDDITEDNPLTLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQP-VSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFN-ASGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLLHFPDPLKKVEKLESL 761 EL ++DIT LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ + S + + L + ML F+ ++ +YM FEV+EP WH++ L++A +ID+V+ +H F CL++C+L P+ LK KL S+ Sbjct: 538 ELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELTLSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLPSAQWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGYHTGFLDTCLKDCMLTNPELLKVFSKLMSV 754
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP2_MOUSE (Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.355e-38 Identity = 86/221 (38.91%), Postives = 134/221 (60.63%), Query Frame = 3 Query: 117 ELSTRLDDITEDNPLTLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIK-----TSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNA-SGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLLHFPDPLKKVEKLESL 761 EL ++DI LL++ALR + A DP +DL + L+ ++ + +E K T +D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+CKHVERQLC W ++ A+ S + + L + ML F+ ++ +YM FEV+EP WH++ L++A +ID+V+ HH F CL++C+L P+ LK KL S+ Sbjct: 538 ELRKPVEDIILTRLEALLELALRMSTANTDPFKDDLKIELMPHDLITQLLRVLAIETKQEKAMTHADPTEL----TLSGLEAFSFDYMVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHALHSAKWFAGAFTLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHISFLDNCLKDCMLTNPELLKVFSKLMSV 754
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP2_DROME (Gamma-tubulin complex component 2 homolog OS=Drosophila melanogaster GN=Grip84 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.931e-32 Identity = 68/201 (33.83%), Postives = 120/201 (59.70%), Query Frame = 3 Query: 117 ELSTRLDDITEDNPLTLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRS-MLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLL 716 EL+ +D + LL + LR ++A DP +DL C + L+ +M+ +I + + + ++GLE F+ +Y+V+WP S+V++ +++KYQM+FR LF+CKHVERQLC W+ + AR F ++ R++ R M+ I +L +YM E++EP+WH+ +++T +++D V++ H F CL+ C+L Sbjct: 527 ELTKNVDHVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMS-----KIMKKEENWQAQPRLDLSGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWKENSIARQFEPQAASLYRAAFTLRQRMMNAIQNLEYYMMIEIIEPNWHIFIEKMKTVENVDNVLRLHQDFLDSCLKNCML 722
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: SPC97_DICDI (Spindle pole body component 97 OS=Dictyostelium discoideum GN=spc97 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.691e-28 Identity = 77/226 (34.07%), Postives = 123/226 (54.42%), Query Frame = 3 Query: 111 LRELSTRLDDITEDN-----------PLTLLDIALR----------STAAAADPCHEDLTCSVERSSLLKRMATLKFVEIKTSSDGVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGAR-AFNASG--TAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLL 716 L +LS R I+E++ P L+D L +T + ++T + SS + T + S+ ++ + + G+E+ + +Y V WPLS++ISRK+L KYQ++FR LF CKHVE+ L W HQ R ++N G T +S + LL M+ F+ +L +YM EVLEP+W+ M N ++T+K++D+VI+ H+ F CL EC+L Sbjct: 820 LLQLSLRTSSISEEDEFKDDLECEFIPYKLVDQLLNIININNFNNPTTTTTTNTSSNNITATTNTSSNNTTINTTVNTTLIQSTSAHEVLKTNKLFGIESLAFNYNVGWPLSLIISRKSLIKYQIIFRHLFLCKHVEKVLVDTWSQHQFRRSSYNKPGLSTLLSFTHLLRHRMIHFLQNLEYYMMLEVLEPNWNKMKNSIKTSKTVDDVIRIHNDFLETCLTECML 1045
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: ALP4_SCHPO (Spindle pole body component alp4 OS=Schizosaccharomyces pombe GN=alp4 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.794e-23 Identity = 79/238 (33.19%), Postives = 115/238 (48.32%), Query Frame = 3 Query: 168 LDIALRS--TAAAADPCHEDLTCSVERSSL---LKRMATLKFVEIKTSSDGVDL--------------------------------EQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVH--QGARAFNASGTAI---SRSSLLCRS-MLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLLHFPDPLKKVEKL 752 LD+ALR T A DP E +T V ++SL L + ++ +E TSS G ++ I G ET L YKV +PLS+++SRKA+ +YQ++FR +HVE QL +W H A N+S I R+S L R+ ML F+ +++Y T EV+E HW L+ A+++D ++Q H F CL+EC+L LK KL Sbjct: 469 LDLALRQPGTITATDPHKEYVTVEVNQTSLIDWLMHIVSISGLEEGTSSQGNEVWNESITKQADVGNETRNFESEHNRSTQGTSKVGSDKDINGFETMQLCYKVPFPLSLILSRKAIIRYQLLFRYFLLLRHVEMQLENSWVQHSKNSAWRLNSSNAKIEQWKRNSWLLRTRMLSFVQKIIYYTTSEVIETHWGKFMGELENARTVDNLMQEHIDFLDTCLKECMLTNSRLLKVQSKL 706
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP3_XENLA (Gamma-tubulin complex component 3 homolog OS=Xenopus laevis GN=tubgcp3 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.537e-13 Identity = 43/139 (30.94%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 312 LEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLL 716 LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L W+ H + + + +L M+ FI+ + +Y+TFEVLE W + N++ A+ +D +I HD F + CLL Sbjct: 625 LEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIWKGHMCNAKLLKGMPELSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVLKAQDLDHIIAAHDVFLDTIISRCLL 763
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP3_HUMAN (Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.219e-12 Identity = 43/139 (30.94%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 312 LEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLL 716 LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H R + + +L M+ FI+ + +Y+TFEVLE W + N++Q A+ +D +I H+ F + CLL Sbjct: 626 LEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLL 764
BLAST of DY257437 vs. ExPASy Swiss-Prot
Match: GCP3_MOUSE (Gamma-tubulin complex component 3 OS=Mus musculus GN=Tubgcp3 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 2.898e-12 Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 3 Query: 312 LEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQG----ARAFNASGTAISRSSLLCRSMLKFINSLLHYMTFEVLEPHWHVMHNRLQTAKSIDEVIQHHDFFP*QCLRECLL 716 LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H R + + +L M+ FI+ + +Y+TFEVLE W + NR+Q A+ +D +I H+ F CLL Sbjct: 624 LEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDHIIAAHEAFLNTITSRCLL 762 The following BLAST results are available for this feature:
BLAST of DY257437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257437 ID=DY257437; Name=DY257437; organism=Citrus sinensis; type=EST; length=1276bpback to top |