CX301117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.994e-58 Identity = 116/188 (61.70%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK+NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ G RKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+VYP+EIVGKRIR ++D S+++KV LD NVE K++TFA VYK LT KDVVFEFP Sbjct: 4 SSAKIVKANGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_RAT (40S ribosomal protein S7 OS=Rattus norvegicus GN=Rps7 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 115/188 (61.17%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GGRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+V+P+EIVGKRIR ++DGS+++KV LD NVE K++TF+ VYK LT KDV FEFP Sbjct: 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_MOUSE (40S ribosomal protein S7 OS=Mus musculus GN=Rps7 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 115/188 (61.17%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GGRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+V+P+EIVGKRIR ++DGS+++KV LD NVE K++TF+ VYK LT KDV FEFP Sbjct: 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_HUMAN (40S ribosomal protein S7 OS=Homo sapiens GN=RPS7 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 115/188 (61.17%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GGRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+V+P+EIVGKRIR ++DGS+++KV LD NVE K++TF+ VYK LT KDV FEFP Sbjct: 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_FELCA (40S ribosomal protein S7 OS=Felis catus GN=RPS7 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 115/188 (61.17%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GGRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+V+P+EIVGKRIR ++DGS+++KV LD NVE K++TF+ VYK LT KDV FEFP Sbjct: 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_BOVIN (40S ribosomal protein S7 OS=Bos taurus GN=RPS7 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.519e-58 Identity = 115/188 (61.17%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 S +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GGRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+V+P+EIVGKRIR ++DGS+++KV LD NVE K++TF+ VYK LT KDV FEFP Sbjct: 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.113e-57 Identity = 114/188 (60.64%), Postives = 145/188 (77.13%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 + +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ GRKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLTAVH+A+LED+VYP+EIVG+RIR ++DGS+++KV LD NVE K++TF+ VYK LT KDVVFEFP Sbjct: 4 TSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_DANRE (40S ribosomal protein S7 OS=Danio rerio GN=rps7 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.237e-57 Identity = 113/188 (60.11%), Postives = 143/188 (76.06%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQ-KGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 + +KIVK NG PDEFE ++Q E ++ +LKA L +LHI+AAKE+E+ G RKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S + K RPRSRTLT VH+A+LED+V+P+EIVGKRIR ++D S+++KV LD NVE K++TFA VYK LT KDV+FEFP Sbjct: 4 TSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELHITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTNVHDAILEDLVFPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVIFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_TAKRU (40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.212e-57 Identity = 113/188 (60.11%), Postives = 144/188 (76.60%), Query Frame = 1 Query: 46 SKSKIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRS-SAQKGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFP 606 + +KIVK NG PDEFE ++Q E ++ +LKA L +L+I+AAKE+E+ G RKAIIIFVP QL+ F K+Q RLVRELEKKFSG+HVV +AQR ILPK +S S K RPRSRTLT+VH+A+LED+V+P+EIVGKRIR ++D S+++KV LD NVE K++TF+ VYK LT KDVVFEFP Sbjct: 4 TSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRSKNKQKRPRSRTLTSVHDAILEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190
BLAST of CX301117 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.957e-55 Identity = 110/185 (59.46%), Postives = 140/185 (75.68%), Query Frame = 1 Query: 55 KIVKSNGATPDEFELNVAQEFANFEASATELKADLHDLHISAAKELEIDGGRKAIIIFVPFRQLRDFHKVQARLVRELEKKFSGRHVVLVAQRTILPKSINRSSAQKGPRPRSRTLTAVHEAVLEDIVYPTEIVGKRIRYRVDGSKILKVFLDPKDLVNVETKLDTFAKVYKSLTNKDVVFEFPV 609 KI K A P EFE NVAQ +FE + E+K+DL DL+I++A ++++ GG+KA++I VP+R + F K+ RLVRELEKKFSG+ VVL+A R IL S+ Q RPRSRTLTAVH+A+LEDIVYP EIVGKR+RYR+DGSKI+KVFLDPK + E KL+TFA VY+ L+ KDVVFEFP+ Sbjct: 7 KIHKDKDAEPTEFEENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQ---RPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGKDVVFEFPL 188 The following BLAST results are available for this feature:
BLAST of CX301117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301117 ID=CX301117; Name=CX301117; organism=Citrus sinensis; type=EST; length=674bpback to top |