CX301108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.897e-43 Identity = 88/184 (47.83%), Postives = 122/184 (66.30%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLIXXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 M RYSA P +ETK AKA G +LR H+K++RE+ I G +LK A +L+NV + K A+P ++ GG+GR A GK++ + WP K+ + F DLLKN E+NAEAKGL++DKL++ HV N APK RRRTYRAHGR+ AY+SSP+HI++I T +R+S KQ A+ R + + Sbjct: 1 MVRYSASPALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT--QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEII-VAEEEEAVPKANDTVSRVSLKQGAKARNLAAR 181
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.934e-42 Identity = 88/184 (47.83%), Postives = 120/184 (65.22%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLIXXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 M RYSA P +ETK AKA G +LR H+K++RE+ I G LK A +L+NV + K A+P ++ GG+GR A GK++ + WP K+ F DLLKN E+NAEAKGL++DKL++ HV N APK RRRTYRAHGR+ AY+SSP+HI++I T +R+S KQ A+ R + + Sbjct: 1 MVRYSAAPALETKCAKARGAYLRTHFKNSREVAFTINGMNLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT--QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEII-VAEEEEAVPKANDTVSRVSLKQGAKARNLAAR 181
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_PHLPP (60S ribosomal protein L17 OS=Phlebotomus papatasi GN=RpL17 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42 Identity = 83/186 (44.62%), Postives = 124/186 (66.67%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI--XXXXXXXXXXXXXPTAARLSRKQIAQGRGKSVK 577 MGRY+ +P TK+ K+ G+HLR+H+K+T E NAIK L+ AQ +L+NV++ K+ +P ++ GG+GR A K++K + WP+K+ L LL+N ESNA+ KGL+VD+LV+ H+ N+AP +RRRTYRAHGRIN YMSSP HI++I PT +LS+K++ + + K ++ Sbjct: 1 MGRYAREPDNATKSCKSRGSHLRVHFKNTHEAANAIKHMPLRRAQRFLKNVVEKKECVPFRRFNGGVGRCAQAKQWKTTQGR--WPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILTEKEEVVAKATDEEPTKKKLSKKKLQRQKEKMMR 184
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_IXOSC (60S ribosomal protein L17 OS=Ixodes scapularis GN=RpL17 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.637e-41 Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MGRYS +P TK+ KA G++LR+H+K+TRE AIK AL+ AQ YL+NV+ K+ +P ++ GG+GR A K + + WP+K+ LL+N ESNA+ KGL+VD+LV+ H+ N+APKMRRRTYRAHGRIN YMSSP HI++I Sbjct: 1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKHMALRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAFGCTQGR--WPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIEVI 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.221e-41 Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 MGRYS +P TK+ KA G++LR+H+K+TRE AIK +L+ AQ YL+NV+ K+ +P ++ GG+GR A K + + WP+K+ LL+N ESNA+ KGL+VD+LV+ H+ N+APKMRRRTYRAHGRIN YMSSP H+++I Sbjct: 1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKRMSLRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAWGCTQGR--WPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHVEVI 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_SUBDO (60S ribosomal protein L17 OS=Suberites domuncula GN=RPL17 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40 Identity = 82/189 (43.39%), Postives = 118/189 (62.43%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLIXXXXXXXXXXXXXPTA--ARLSRKQIAQGRGKSVKVGG 586 MGRY+ +P+ K+ KA G LR+H+K+TRE AIKG LK A YL +V++ K IP +++GG+GR A K +K PG + WP+K+ + + LL+N ESNAE K L D LV+ H+ N+A +RRRTYRAHGRIN YM+SP HI++ TA ++S+K++ + + K+ GG Sbjct: 1 MGRYAIEPENPAKSCKARGEDLRVHFKNTRETAQAIKGMHLKKALRYLNDVIEKKQIIPFRRFSGGVGRKAQAKNFKTPGSQGRWPKKSAQFLIQLLRNAESNAEVKMLNTDALVIDHIQVNRAAHLRRRTYRAHGRINPYMTSPCHIEMFLVEKDEAVPKGEDDTAQKKKVSQKKLKKQKLKAALSGG 189
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_MAIZE (60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.983e-40 Identity = 84/151 (55.63%), Postives = 103/151 (68.21%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 M +YS +P TK+AKA G LR+H+K+TRE A++ L A+ YLE+V+ K AIP +Y GG+GR A K + G WP K+ R LDLLKN ESNA+ KGL+VD L VSH+ NQA K RRRTYRAHGRIN YMSSP HI+LI Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQG-RWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELI 150
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.001e-39 Identity = 79/151 (52.32%), Postives = 106/151 (70.20%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 M RY+A K+A++ G++LR+ +K+TRE AI G L+ AQ++LENVL+ K+A+P+ +Y GG GR A GK++ + WP K+ L LLKN E+NA+AKGL+ LVV H+ NQAPK RRRTYRAHGRIN YMS+P HI+LI Sbjct: 1 MVRYAATEIAPAKSARSRGSYLRVSFKNTRETAQAINGWKLQRAQKFLENVLEKKEAVPMRRYAGGTGRAAQGKQFGV--SRARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELI 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39 Identity = 78/151 (51.66%), Postives = 106/151 (70.20%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 M RYS P+ TK+ K+ G++LR+H+K+TRE AIKG ++ A +YL++V K +P +Y GG+GR A K++ + WP+K+ L +LKN ESNAE KGL+VD LV+ H+ N+APKMRRRTYRAHGRIN YMSSP HI++I Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGR--WPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMI 149
BLAST of CX301108 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39 Identity = 78/151 (51.66%), Postives = 106/151 (70.20%), Query Frame = 2 Query: 26 MGRYSAKPKVETKAAKASGTHLRIHYKHTREIGNAIKGRALKNAQEYLENVLQFKDAIPVTKYTGGIGRHAIGKKYKAPGDKVSWPQKATRTFLDLLKNVESNAEAKGLEVDKLVVSHVNCNQAPKMRRRTYRAHGRINAYMSSPAHIQLI 478 M RYS P+ TK+ K+ G++LR+H+K+TRE AIKG ++ A +YL++V K +P +Y GG+GR A K++ + WP+K+ L +LKN ESNAE KGL+VD LV+ H+ N+APKMRRRTYRAHGRIN YMSSP HI++I Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGR--WPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMI 149 The following BLAST results are available for this feature:
BLAST of CX301108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301108 ID=CX301108; Name=CX301108; organism=Citrus sinensis; type=EST; length=718bpback to top |