CX301102

Overview
NameCX301102
Unique NameCX301102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7497 contig Csv1_Contig7497:45..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.157e-94
Identity = 161/233 (69.10%), Postives = 192/233 (82.40%), Query Frame = 2
Query:    2 RQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            +QQELVS+V+ A+KGP ILVLMSGGPID++FA+ D +I AI+WAGYPGQ GGTAIADILFG++NPGGKLPMTWYPQ+Y+TNLPMTEM+MRP  SKR PGRTYRFY GPVVYPFGHG+SYT F              + GR+G    T+SGK+I+VTHA+C+RL+LGV V+V NVGS+DG HT+LVFS PP G WAP KQLVAFE+VHV  G ++RV +NIHVCKYLSVVDR+G
Sbjct:  508 KQQELVSRVAKAAKGPVILVLMSGGPIDISFAEKDRKIPAIVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDYLTNLPMTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVIPIAVRGRNG----TVSGKSIRVTHARCDRLSLGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQLVAFERVHVAVGEKKRVQVNIHVCKYLSVVDRAG 736          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: XYNB_PRUPE (Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.593e-84
Identity = 148/233 (63.52%), Postives = 179/233 (76.82%), Query Frame = 2
Query:    5 QQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLT-LGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            QQELVS+V+ AS+GPTILVLMSGGPIDV FAKNDPRI+AIIW GYPGQAGGTAIA++LFGT+NPGGKLPMTWYPQ Y+T+LPMT+MAMR   ++ YPGRTYRFY GPVV+PFG G+SYT F              L     + N+T+  K ++V+H  CN L+ L V VDVKN GS DG HTLLVF++PP G WA  KQL+ F K+H+  G+++RV I +HVCK+LSVVDR G
Sbjct:  198 QQELVSRVARASRGPTILVLMSGGPIDVTFAKNDPRISAIIWVGYPGQAGGTAIANVLFGTANPGGKLPMTWYPQNYVTHLPMTDMAMRADPARGYPGRTYRFYIGPVVFPFGLGLSYTTFAHNLAHGPTLVSVPLTSLKATANSTMLSKTVRVSHPDCNALSPLDVHVDVKNTGSMDGTHTLLVFTSPPDGKWASSKQLMGFHKIHIATGSEKRVRIAVHVCKHLSVVDRFG 430          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.131e-70
Identity = 135/238 (56.72%), Postives = 165/238 (69.33%), Query Frame = 2
Query:    5 QQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATI--SGKAIKVTHAKCNRL-TLGVQVDVKNVGSKDGAHTLLVFSTPPAG---HWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            QQ+LV++V+ AS+GP ILVLMSGGPIDV FAKNDPR+AAIIWAGYPGQAGG AIA+I+FG +NPGGKLPMTWYPQ+Y+  +PMT MAMR S +  YPGRTYRFYKGPVV+PFG G+SYT F                    S N  +  S  +IKV+H  CN    + + V+V N G  DG HT+ VF+ PP         +KQL+AFEKVHV AGA+Q V +++  CK+L VVD  G
Sbjct:  513 QQDLVTRVAQASRGPVILVLMSGGPIDVTFAKNDPRVAAIIWAGYPGQAGGAAIANIIFGAANPGGKLPMTWYPQDYVAKVPMTVMAMRASGN--YPGRTYRFYKGPVVFPFGFGLSYTTFTHSLAKSPLAQLSVSLSNLNSANTILNSSSHSIKVSHTNCNSFPKMPLHVEVSNTGEFDGTHTVFVFAEPPINGIKGLGVNKQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYG 748          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.296e-59
Identity = 113/239 (47.28%), Postives = 148/239 (61.92%), Query Frame = 2
Query:    2 RQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLG------VQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            +QQELV +V+ A+KGP +LV+MSGG  D+ FAKNDP+IA I+W GYPG+AGG AIADI+FG  NP GKLPMTWYPQ Y+  +PMT M MRP ++  YPGRTYRFY G  VY FG G+SYT F              L+  H  +  +   +++      C     G      V + V+N G ++G HT+ +F+TPPA H +P K LV FEK+ +    +  V   + +CK LSVVD  G
Sbjct:  524 QQQELVIQVAKAAKGPVLLVIMSGGGFDITFAKNDPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSYVEKVPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGLEENH--VCRSSECQSLDAIGPHCENAVSGGGSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIG 760          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.168e-58
Identity = 108/238 (45.38%), Postives = 150/238 (63.03%), Query Frame = 2
Query:    2 RQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLG-----VQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            +QQELV++V+MA++GP +LV+MSGG  D+ FAKND +I +I+W GYPG+AGG AIAD++FG  NP G LPMTWYPQ Y+  +PM+ M MRP +SK YPGR+YRFY G  VY F   ++YT F              LD  H   ++    +++      C     G     V ++VKN G + G+HT+ +F+T P  H +P KQL+ FEK+ +    +  V  N++VCK LSVVD +G
Sbjct:  514 KQQELVTRVAMAARGPVVLVIMSGGGFDITFAKNDKKITSIMWVGYPGEAGGLAIADVIFGRHNPSGNLPMTWYPQSYVEKVPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSLDENHPCRSSEC--QSLDAIGPHCENAVEGGSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETG 749          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.449e-50
Identity = 106/242 (43.80%), Postives = 141/242 (58.26%), Query Frame = 2
Query:    2 RQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNF--XXXXXXXXXXXXXXLDGRHGSINATISGKAIK------VTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFS-TPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            +Q++LVS V+  SK P ILVL  GGP+DV FAKNDPRI +IIW GYPG+ GG A+A+I+FG  NPGG+LP TWYP+ + T++ M++M MR + S+ YPGRTYRFY GP VY FG G+SYT F                L  +         G+ ++      V    C  L   V+V V N G  DG+H +++FS  PP     P KQL+ +++VHV +         I  CK LSV +  G
Sbjct:  528 KQKDLVSHVAAVSKKPVILVLTGGGPVDVTFAKNDPRIGSIIWIGYPGETGGQALAEIIFGDFNPGGRLPTTWYPESF-TDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKILSAPIRLSLSELLPQQSSHKKQLQHGEELRYLQLDDVIVNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVG 768          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL5_ARATH (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.293e-48
Identity = 98/238 (41.18%), Postives = 143/238 (60.08%), Query Frame = 2
Query:    5 QQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPP------AGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            Q++LV  V+ A+K   +LV+MS GPID++FAKN   I A++W GYPG+AGG AIA ++FG  NP G+LP TWYPQE+   + MT+M MRP+ +  +PGR+YRFY G  +Y FG+G+SY++F               +    ++N T S   + ++   C+ L + + + VKN G + G+H +LVF  PP       G   P  QLV FE+V V     ++  ++  VCK LS+VD  G
Sbjct:  511 QEKLVRDVANAAKKTVVLVIMSAGPIDISFAKNLSTIRAVLWVGYPGEAGGDAIAQVIFGDYNPSGRLPETWYPQEFADKVAMTDMNMRPNSTSGFPGRSYRFYTGKPIYKFGYGLSYSSFSTFVLSAPSIIHIKTNPIM-NLNKTTS---VDISTVNCHDLKIRIVIGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEVGRSMTEKFTVDFDVCKALSLVDTHG 744          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BXL7_ARATH (Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.177e-44
Identity = 97/240 (40.42%), Postives = 142/240 (59.17%), Query Frame = 2
Query:    2 RQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYT----NFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG---HWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSG 700
            +QQEL++ V+ A+K P +LVL+ GGP+D++FA N+ +I +IIWAGYPG+AGG AI++I+FG  NPGG+LP+TWYPQ ++ N+ MT+M MR +    YPGRTY+FYKGP VY FGHG+SY+     F                    S+  T+  +  K     C+     V V+V+N G   G H +L+F+    G        KQLV F+ + +  G +  +   I +C++LS  +  G
Sbjct:  510 KQQELITSVANAAKKPVVLVLICGGPVDISFAANNNKIGSIIWAGYPGEAGGIAISEIIFGDHNPGGRLPVTWYPQSFV-NIQMTDMRMRSATG--YPGRTYKFYKGPKVYEFGHGLSYSAYSYRFKTLAETNLYLNQSKAQTNSDSVRYTLVSEMGK---EGCDVAKTKVTVEVENQGEMAGKHPVLMFARHERGGEDGKRAEKQLVGFKSIVLSNGEKAEMEFEIGLCEHLSRANEFG 743          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BGLX_SALTY (Periplasmic beta-glucosidase OS=Salmonella typhimurium GN=bglX PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 69/228 (30.26%), Postives = 110/228 (48.25%), Query Frame = 2
Query:    5 QQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPM------TEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVF-STPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHV 667
            Q++L++ +    K P +LVLM+G P+  A  K D +  AI+   + G  GG AIAD+LFG  NP GKLP++ +P+  +  +P+      T     P +  +Y  R +    GP +YPFG+G+SYT F                      + T+S      T  +  ++T    V+V N G ++GA  + ++     A    P KQL  FEK+ +  G ++ V   I +
Sbjct:  531 QRDLITALKATGK-PLVLVLMNGRPL--ALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPIS-FPRS-VGQIPVYYSHLNTGRPYNPEKPNKYTSRYFDEANGP-LYPFGYGLSYTTFTVS-------------------DVTLSSP----TMQRDGKVT--ASVEVTNTGKREGATVIQMYLQDVTASMSRPVKQLKGFEKITLKPGERKTVSFPIDI 727          
BLAST of CX301102 vs. ExPASy Swiss-Prot
Match: BGLX_ECOLI (Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16
Identity = 71/229 (31.00%), Postives = 107/229 (46.72%), Query Frame = 2
Query:    5 QQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPM------TEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFXXXXXXXXXXXXXXLDGRHGSINATISG-KAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVF-STPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHV 667
            Q++L++ +    K P +LVLM+G P+  A  K D +  AI+   + G  GG AIAD+LFG  NP GKLPM+ +P+  +  +P+      T       +  +Y  R +    G  +YPFG+G+SYT F                        T+S  K    T  +  ++T  VQ  V N G ++GA  + ++     A    P KQL  FEK+ +  G  Q V   I +
Sbjct:  531 QRDLIAALKATGK-PLVLVLMNGRPL--ALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMS-FPRS-VGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANG-ALYPFGYGLSYTTF------------------------TVSDVKLSAPTMKRDGKVTASVQ--VTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDI 727          
The following BLAST results are available for this feature:
BLAST of CX301102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
BXL2_ARATH6.157e-9469.10Probable beta-D-xylosidase 2 OS=Arabidopsis thalia... [more]
XYNB_PRUPE2.593e-8463.52Putative beta-D-xylosidase (Fragment) OS=Prunus pe... [more]
BXL1_ARATH2.131e-7056.72Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL... [more]
BXL4_ARATH1.296e-5947.28Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL... [more]
BXL3_ARATH4.168e-5845.38Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL... [more]
BXL6_ARATH2.449e-5043.80Probable beta-D-xylosidase 6 OS=Arabidopsis thalia... [more]
BXL5_ARATH2.293e-4841.18Probable beta-D-xylosidase 5 OS=Arabidopsis thalia... [more]
BXL7_ARATH1.177e-4440.42Probable beta-D-xylosidase 7 OS=Arabidopsis thalia... [more]
BGLX_SALTY2.093e-1730.26Periplasmic beta-glucosidase OS=Salmonella typhimu... [more]
BGLX_ECOLI1.772e-1631.00Periplasmic beta-glucosidase OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionC08005G06SK PhyRootSw1 Citrus sinensis cDNA clone C08005G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301102 ID=CX301102; Name=CX301102; organism=Citrus sinensis; type=EST; length=704bp
GCGCCAACAAGAACTAGTCTCTAAGGTTTCCATGGCATCTAAAGGTCCAA
CCATATTGGTTTTAATGTCTGGTGGCCCTATTGATGTAGCTTTTGCTAAG
AACGACCCACGAATTGCTGCTATTATATGGGCTGGGTACCCGGGCCAAGC
CGGTGGAACGGCGATTGCTGATATCTTGTTTGGAACTTCTAATCCAGGTG
GCAAGCTCCCTATGACATGGTACCCACAGGAGTATATTACAAATCTACCA
ATGACAGAAATGGCAATGCGGCCTAGCCAATCAAAACGTTACCCTGGAAG
AACCTACAGATTTTACAAAGGTCCAGTGGTGTACCCATTTGGTCACGGAA
TGAGTTACACAAATTTTGTACACACTGTGGCCAACGCACCTACGGTGGTT
GCGGTTCCCCTCGATGGCCGGCATGGCTCAATAAATGCAACTATTTCAGG
AAAGGCAATCAAAGTCACGCATGCAAAATGCAACAGGCTCACATTGGGTG
TTCAGGTTGATGTGAAAAATGTTGGTTCCAAGGACGGCGCACACACATTG
CTAGTTTTCTCCACACCACCGGCCGGACATTGGGCTCCGCATAAGCAATT
GGTGGCCTTTGAGAAAGTGCACGTCCCTGCTGGGGCTCAGCAGCGAGTTG
GAATCAATATTCATGTGTGCAAGTACTTGAGTGTTGTGGATCGTTCTGGA
ACTC
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