EY679047

Overview
NameEY679047
Unique NameEY679047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679047 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 5.766e-68
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 3 
Query:   69 PPEALPRNETIGGYPFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKICEPLEEDSFRPILHHYDEP 431
            P E+LPRNET+GGY FVCNNDTM ENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHG+FEAASFGGTNIDPTAWEDKK  GESRFPAQVRV+TRKICEPLEEDSFRPILHHYD P
Sbjct:   64 PAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGP 184

HSP 2 Score: 40.817 bits (94), Expect = 5.766e-68
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 1 
Query:  430 P*FRLELNVPEAISLLDIFEE 492
            P FRLELN+PEAISLLDIFEE
Sbjct:  184 PKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of EY679047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA5.766e-6891.74B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-E04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679047 ID=EY679047; Name=EY679047; organism=Citrus sinensis; type=EST; length=922bp
GGGGCGGTACCGGGTCCGGGAAATCCCGGGGTCGACCCACGCGATCCGGA
GGTTCAAGACTCTCCCACCCCCCTGAGGCTTTGCCTAGAAACGAAACCAT
TGGTGGCTATCCCTTTGTCTGCAACAATGATACCATGGCTGAGAATCTCA
AAAGACAGCTCTTTGGATTGCCTCCACGTTACAGGGATTCAGTGAGAGCT
ATAACCCCTGGCTTGCCCCTTTTCCTTTATAACTATTCCACCCACCAGCT
GCATGGAATTTTTGAGGCTGCTAGCTTTGGAGGTACAAATATTGATCCTA
CAGCCTGGGAAGACAAGAAATGCCCTGGCGAATCACGATTCCCAGCTCAA
GTCCGGGTTGTTACACGGAAAATCTGTGAACCGCTTGAAGAGGATTCCTT
CAGGCCAATTCTCCATCACTATGATGAGCCCCTAGTTCCGCCTTGAACTA
AATGTGCCTGAAGCAATTTCTCTCTTGGACATATTTGAAGAACGAGACTC
TTGAGCAATTGCTGTCATACAAACCATACGAAACAAAAGCTTACCGATTC
CAAGTACCAGTTAGTGAAATTACACAACATAAAAGTGGGTTTGATGAAAC
AATTAGGGGAAAGAATTAAGAAAATTGGTGGCCTTCTTTATATTGATACT
TTAGAAGAAAGTATGTTAGGGGGAAGTAAGGAAAGCTGAAATAAGCCAAC
CATCCTTTGATTGTAACCTTTTTGGAAGGGAGGCTGATGGTAGGGTGGAT
TGGCACTTTATGTACCATTTTGGTTTAACTTTGGGATACGACTCCAAACG
CACTTTTTTTGGAACTTTTCTTCCTAAGATAAAAATAAAAAATAACGGGG
CGGTCCTCCTCTTAATATGAATTCTAGATCTAGCTTTCGGTTAGCCTATC
GACTTCTATAGACTCTTCTCCA
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