EY680135

Overview
NameEY680135
Unique NameEY680135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: PROP_SALTY (Proline/betaine transporter OS=Salmonella typhimurium GN=proP PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.090e-30
Identity = 62/150 (41.33%), Postives = 94/150 (62.67%), Query Frame = 3
Query:  321 RQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGGAVA 770
            + + AA +GNA+EW+DF VYGF+A  + + FFP  D    ++ ALATF V F +RP+GG+  GM  D+ GR+  + + I +M++S   I   PSYA IG+ AP+L+++ +M  GF+ GGEY  A+ F+ E  P   +G   S    G++A
Sbjct:   25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 174          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: PROP_ECOLI (Proline/betaine transporter OS=Escherichia coli (strain K12) GN=proP PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 61/150 (40.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  321 RQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGGAVA 770
            + + AA +GNA+EW+DF VYGF+A  + + FFP  D    ++ ALATF V F +RP+GG+  GM  D+ GR+  + + I +M++S   I   PSY  IG+ AP+L+++ +M  GF+ GGEY  A+ F+ E  P   +G   S    G++A
Sbjct:   25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 174          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: PROP_ECO57 (Proline/betaine transporter OS=Escherichia coli O157:H7 GN=proP PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 61/150 (40.67%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  321 RQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGGAVA 770
            + + AA +GNA+EW+DF VYGF+A  + + FFP  D    ++ ALATF V F +RP+GG+  GM  D+ GR+  + + I +M++S   I   PSY  IG+ AP+L+++ +M  GF+ GGEY  A+ F+ E  P   +G   S    G++A
Sbjct:   25 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 174          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: CITH_KLEPN (Citrate-proton symporter OS=Klebsiella pneumoniae GN=citH PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 3
Query:  279 VFLMQTAKQGVSRTRQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGG-AVAWGVSDGAAKGGFGYHFFSSPKTLEFGGW 854
            V +M TA  G +R   ++    GN LE +DF ++GF A+ IA  FFP+  E+ASL+M  A FG GF MRP+G I+LG Y D+ GR+  + + + +M     LI   PSY  IG+ AP+L+++ R+L GF+ G E    + +L E      KG   S   G   VA  V   AA  GF  +    P  +   GW
Sbjct:   16 VRMMATA--GGARIGAILRVTSGNFLEQFDFFLFGFYATYIAHTFFPASSEFASLMMTFAVFGAGFLMRPIGAIVLGAYIDKVGRRKGLIVTLSIMATGTFLIVLIPSYQTIGLWAPLLVLIGRLLQGFSAGAELGGVSVYLAEIATPGRKGFYTSWQSGSQQVAIMV---AAAMGFALNAVLEPSAISDWGW 203          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: PROP_STAEQ (Putative proline/betaine transporter OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=proP PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.007e-28
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 3
Query:  306 GVSRTRQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSED-EYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPP 719
            G +  + V+A  IGNA+EW+DF +Y +LA II++ FF   D +   L+   ATF + F +RP+GGI+ G+  D+ GRK  +   I LM  S  LI   P+Y  IG+ AP+L+++AR+L GF+TGGEYA A  ++ ES P
Sbjct:    4 GNNAKKTVIATGIGNAMEWFDFGLYSYLAVIISKNFFSQVDNDQLKLVFTFATFAIAFLLRPIGGIVFGIIGDKYGRKIVLTTTIILMAFSTLLIGVLPTYNEIGVWAPILLLLARVLQGFSTGGEYAGAMVYVAESSP 142          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: SHIA_ECOLI (Shikimate transporter OS=Escherichia coli (strain K12) GN=shiA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.530e-28
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 3
Query:  321 RQVVAAVIGNALEWYDFIVYGFLASIIA-RQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGGAVAWGV 779
            R  + +  G  ++WYDF++YG  A+++  R+FFP        L A ATFGVGF  RP+GG++ G + DR GRK  + L + +M ++ ALI   PS++ IG  AP+L+V  R + GFA GGE+  A    VES P + K    SG     V +GV
Sbjct:   22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGV---QVGYGV 172          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: CITA_SALTY (Citrate-proton symporter OS=Salmonella typhimurium GN=citA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.455e-27
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 3
Query:  327 VVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKG 734
            ++    GN LE +DF ++GF A+ IAR FFP+E E+ASL++  A FG GF MRPVG I+LG Y DR GR+  + + + +M     LIA  P Y  IG+ AP L+++ R+L GF+ G E    + +L E      KG
Sbjct:   17 ILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFASLMLTFAVFGSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLLGRLLQGFSAGVELGGVSVYLSEIATPGNKG 152          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: CITA_SALTI (Citrate-proton symporter OS=Salmonella typhi GN=citA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.455e-27
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 3
Query:  327 VVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKG 734
            ++    GN LE +DF ++GF A+ IAR FFP+E E+ASL++  A FG GF MRPVG I+LG Y DR GR+  + + + +M     LIA  P Y  IG+ AP L+++ R+L GF+ G E    + +L E      KG
Sbjct:   17 ILRVTSGNFLEQFDFFLFGFYATYIARTFFPAESEFASLMLTFAVFGSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGTLLIALVPGYQTIGLAAPALVLLGRLLQGFSAGVELGGVSVYLSEIATPGNKG 152          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: CITA_ECOLX (Citrate-proton symporter OS=Escherichia coli GN=citA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.219e-27
Identity = 56/136 (41.18%), Postives = 84/136 (61.76%), Query Frame = 3
Query:  327 VVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKG 734
            ++    GN LE +DF ++GF A+ IA+ FFP+E E+A+L++  A FG GF MRP+G ++LG Y DR GR+  + + + +M     LIA  P Y  IG+ AP+L++V R+L GF+ G E    + +L E      KG
Sbjct:   14 ILRVTSGNFLEQFDFFLFGFYATYIAKTFFPAESEFAALMLTFAVFGSGFLMRPIGAVVLGAYIDRIGRRKGLMITLAIMGCGTLLIALVPGYQTIGLLAPVLVLVGRLLQGFSAGVELGGVSVYLSEIATPGNKG 149          
BLAST of EY680135 vs. ExPASy Swiss-Prot
Match: OUSA_DICD3 (Osmoprotectant uptake system A OS=Dickeya dadantii (strain 3937) GN=ousA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.583e-26
Identity = 61/150 (40.67%), Postives = 92/150 (61.33%), Query Frame = 3
Query:  321 RQVVAAVIGNALEWYDFIVYGFLASIIARQFFPSEDEYASLLMALATFGVGFFMRPVGGILLGMYSDRKGRKAAMQLIIRLMTVSIALIAFAPSYAAIGMGAPMLIVVARMLPGFATGGEYASATAFLVESPPAHPKGL*RSGAFGGAVA 770
            + + AA +GNA+EW+DF VYGF+A  + + FFP +    S+  ALATF V F M P+GG+  G   D+ GR+  + + I +M++S   I   PSY  IG+ AP+L+++A+M  GF+ GGEY  A+ F+ E  P   +G   S    G++A
Sbjct:   26 KAITAAALGNAMEWFDFGVYGFVAYALGQVFFPGDPGVQSIA-ALATFSVPFLM-PLGGVFFGALGDKYGRQKILAITIIIMSISTFCIGLIPSYERIGIWAPILLLLAKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIA 173          
The following BLAST results are available for this feature:
BLAST of EY680135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PROP_SALTY4.090e-3041.33Proline/betaine transporter OS=Salmonella typhimur... [more]
PROP_ECOLI1.554e-2940.67Proline/betaine transporter OS=Escherichia coli (s... [more]
PROP_ECO571.554e-2940.67Proline/betaine transporter OS=Escherichia coli O1... [more]
CITH_KLEPN1.554e-2938.34Citrate-proton symporter OS=Klebsiella pneumoniae ... [more]
PROP_STAEQ1.007e-2844.60Putative proline/betaine transporter OS=Staphyloco... [more]
SHIA_ECOLI6.530e-2840.91Shikimate transporter OS=Escherichia coli (strain ... [more]
CITA_SALTY1.455e-2743.38Citrate-proton symporter OS=Salmonella typhimurium... [more]
CITA_SALTI1.455e-2743.38Citrate-proton symporter OS=Salmonella typhi GN=ci... [more]
CITA_ECOLX7.219e-2741.18Citrate-proton symporter OS=Escherichia coli GN=ci... [more]
OUSA_DICD33.583e-2640.67Osmoprotectant uptake system A OS=Dickeya dadantii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-G09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680135 ID=EY680135; Name=EY680135; organism=Citrus sinensis; type=EST; length=886bp
CGGGCGGGTACGGGTCCGGATTCCCGGGTCGACGGCAACCCACCAAGCTG
ATGGGCAGCGAAGACTTCGCCTGGATGCTGCAACGCTGCCCCGGCAGCTA
CCTGTTTATCGGCAACGGCGTCTCGCGGCCGATGGTCCACAACCCCGCCT
ATGACTTCAACGACGACATCCTGTTGACCGGCGCCGCCTACTGGGGCGCG
CTGGCCGAGAGCTGGCTCAAGCCCGCCTGACGACCTCTTTTTTCTGCCGC
TGGACCCTTTCCCAACAGGTTGAATGGAGTGTTCCTCATGCAGACTGCAA
AACAGGGCGTATCCCGCACCCGCCAGGTCGTGGCGGCGGTGATTGGCAAT
GCGCTGGAATGGTATGACTTCATCGTTTACGGCTTTCTCGCCAGCATCAT
CGCCCGGCAATTTTTCCCGTCGGAGGATGAATACGCCTCGCTGCTGATGG
CCCTGGCCACCTTTGGCGTCGGCTTCTTCATGCGCCCGGTGGGCGGGATT
CTGCTGGGCATGTATTCGGACCGTAAAGGCCGCAAGGCCGCGATGCAGTT
GATCATCCGGCTGATGACCGTCTCCATCGCCTTGATCGCTTTCGCTCCCA
GCTACGCCGCGATCGGCATGGGCGCGCCGATGCTGATCGTGGTTGCACGC
ATGCTCCCGGGGTTTGCCACCGGCGGCGAATACGCCAGTGCCACGGCGTT
CCTGGTGGAAAGCCCGCCGGCTCATCCCAAGGGGTTGTAACGGTCCGGGG
CATTTGGGGGGGCAGTGGCCTGGGGGGTTTCCGACGGCGCCGCGAAGGGG
GGCTTTGGTTACCACTTTTTTTCATCCCCCAAAACCCTTGAATTCGGGGG
GTGGGGCCCGGCCGATTCATCTTGGGCTTGTGTATA
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