CX301064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.499e-19 Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 481 T+LLW ++F N+F YYG+VLL S+ Y ++ T+ +E PGLL ++DRVGRK +M I FI L L +LT L AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A ++ S Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISNQRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGLLVTLWIIDRVGRKKTMAICFIIFSFSALLLFLCVGRNVLTVFLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19 Identity = 62/203 (30.54%), Postives = 94/203 (46.31%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXXPFETKGKEL 580 T+LLW ++F N+F YYG+VLL S+ Y+++ T+ +E PG+L ++DR+GRK +M + FI + L L +LT LL AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A V L +S + T P ETKG+ L Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAGVASCFLPIETKGRAL 517
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18 Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA-VGLVTSCHQTXXXXXXXXXXXXXXXXXXXXPFETKGKEL 580 T+LLW ++F N+F YYG+VLL S+ Y+++ T+ +E PG+L ++DR+GRK +M + F+ + L L +LT LL AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A V L +S + T P ETKG+ L Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFVIFSLCSLLLFICIGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLT--LAVYSGCCLLAALASCFLPIETKGRAL 517
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 481 T+LLW ++F N+F YYG+VLL S+ Y+++ T+ +E PG+L ++DR+GRK +M + F+ L L +LT LL AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A ++ S Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 481 T+LLW ++F N+F YYG+VLL S+ Y+++ T+ +E PG+L ++DR+GRK +M + F+ L L +LT LL AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A ++ S Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASV---------YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 481 T+LLW ++F N+F YYG+VLL S+ Y+++ T+ +E PG+L ++DR+GRK +M + F+ L L +LT LL AR F G F A ++ PE+YPT+ R+ G G + R+G ++ P +A ++ S Sbjct: 317 TLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVVFSFCSLLLFICVGRNMLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLES 485
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5) HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17 Identity = 50/160 (31.25%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDA------SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVA 463 TILLW ++ +F YYG+VL + S Y ++ T+ AE PGL+ L+++ GRK +M + + IF L +T L+ AR F G F A ++ PE+YPT++R+ G G A+ RIG +V P +A Sbjct: 319 TILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIA 478
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: S22A7_BOVIN (Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 48/152 (31.58%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 17 VLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--TIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 466 V++FG +F YYG+ L + +VY+ + ELP L L V GR+L+M T++ + + L LV+ + TAL + FS F A +F E+YPT +R TG G+ VGR+GG + PL A+ Sbjct: 351 VVWFGVNFSYYGVSL------------------DLSGLGLNVYLTQLVFGAVELPSKLLVYLSVRHAGRRLTMAGTLLGAALAVGLRILVSPEMKSWSTALAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAAL 484
BLAST of CX301064 vs. ExPASy Swiss-Prot
Match: YCEI_BACSU (Putative metabolite transport protein yceI OS=Bacillus subtilis GN=yceI PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 51/165 (30.91%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 2 TILLWVLYFGNSFVYYGIVLLAXXXXXXXXXXXXXXXXXENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTA--LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 487 T++L +++F F YYG+ L + + V + + A+LPG +AA L+++ GRK + + I T S ++LLTA LLS F++G + + + PE YPT++R+TG+G A GRIGG+ PL+ VG + + H Sbjct: 217 TVMLSIVWFCVVFSYYGMFL-----------WLPSVMLLKGFSMIQSFEYVLLMTLAQLPGYFSAAWLIEKAGRKWILVVYLIGTAGSAYFFGTADSLSLLLTAGVLLS---FFNLGAWGVLYAYTPEQYPTAIRATGSGTTAAFGRIGGIFGPLL-VGTLAARH 366 The following BLAST results are available for this feature:
BLAST of CX301064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301064 ID=CX301064; Name=CX301064; organism=Citrus sinensis; type=EST; length=674bpback to top |