CX301054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.215e-37 Identity = 74/144 (51.39%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 PIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 P+ I++GGILPFG IFI+LFFIL SIW HQ TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+I+ S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.215e-37 Identity = 74/144 (51.39%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 PIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 P+ I++GGILPFG IFI+LFFIL SIW HQ TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+I+ S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.215e-37 Identity = 74/144 (51.39%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 PIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 P+ I++GGILPFG IFI+LFFIL SIW HQ TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+I+ S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 519 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.215e-37 Identity = 74/144 (51.39%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 PIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 P+ I++GGILPFG IFI+LFFIL SIW HQ TC+E TI+LCYF LC+EDY W WRS+LTSG + +KL+I+ S ILYFGY +I FF+ TGTIGF+ACFWF IYS VK+D Sbjct: 520 PLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.237e-34 Identity = 75/146 (51.37%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MNP SIL+GGILPFGA+FIEL FILTS+W +Q T AEI+IV+CYFQLC+ED+ WWWRS+LT+GSS L I+K +S +L F Y I S AF LTGTIGFY+C++ R IYSS+ I+ Sbjct: 497 MNPYLSILMGGILPFGAVFIELHFILTSLWDNQFYYIFGFLFIVLMILIVTSAEISIVMCYFQLCAEDHHWWWRSFLTAGSS-SLYMFIYSVSFFRYLGITKFISSLLDFSYSFIMSLAFAALTGTIGFYSCYFLVRKIYSSIHIN 641
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MN IL+ GILPFGA+FIELFFI ++IW +Q +C++I+IV+ YFQLC+EDY WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 498 MNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MN IL+ GILPFGA+FIELFFI ++IW +Q +C++I+IV+ YFQLC+EDY WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 497 MNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MN IL+ GILPFGA+FIELFFI ++IW +Q +C++I+IV+ YFQLC+EDY WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 498 MNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MN IL+ GILPFGA+FIELFFI ++IW +Q +C++I+IV+ YFQLC+EDY WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 497 MNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CX301054 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.510e-33 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 MNPIFSILIGGILPFGAIFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSXXXXXXXXXXXXXTKLEISKPVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 438 MN IL+ GILPFGA+FIELFFI ++IW +Q +C++I+IV+ YFQLC+EDY WWWR++L SG S KL+I + + +LYFGY + +F++LTGTIGFYA + F R IY++VKID Sbjct: 497 MNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642 The following BLAST results are available for this feature:
BLAST of CX301054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301054 ID=CX301054; Name=CX301054; organism=Citrus sinensis; type=EST; length=671bpback to top |