CX301043

Overview
NameCX301043
Unique NameCX301043
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 56/171 (32.75%), Postives = 94/171 (54.97%), Query Frame = 1
Query:   49 NPFDVLKTRLMAS-EGKAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNE-LAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAK----VYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPIFGVE 543
            +P D++K R+ AS +G    S+ +A  E+   +GIKG ++G+     RA +L  +++  YD IK +I   G+++ + L V            + T SP D+V+TR+MNQP D+     +YK   DC  K    +G  GLY GF+P W R  P T +  +++E ++ + G++
Sbjct:  122 SPTDLIKVRMQASSKGVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGLQVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISGLYKGFLPNWFRIGPHTIVTFILYEYLRKVSGIK 292          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 52/165 (31.52%), Postives = 84/165 (50.91%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA--DAKV--YKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A        + ++   +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +A             A   +P D+VRTR+MNQ A  D +   YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQNSAVQGGMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: UCP5_HUMAN (Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA---DAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 525
            NP DVLK R+ A       S+  +  ++Y+ +G +G +RG+     RA ++ G ++  YD  K  +  SG++ + +              A   +P D+VRTR+MNQ A      +YKG VD ILK+   +G   LY GF P W R  P   +  + +EQ+K
Sbjct:  160 NPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 321          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18
Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKA-GASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAKV----YKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A      G  +GN  N +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +              A   +P D+VRTR+MNQ +   V    YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQGSLIQGGMIGNFIN-IYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKKL 289          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: UCP5_MOUSE (Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17
Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA---DAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 525
            NP DVLK R+ A       S+  +  ++Y+ +G +G +RG+     RA ++ G ++  YD  K  +  SG++ + +              A   +P D+VRTR+MNQ A      +YKG +D ILK+   +G   LY GF P W R  P   +  + +EQ+K
Sbjct:  160 NPTDVLKIRMQAQGSLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 321          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: S2534_DANRE (Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 53/172 (30.81%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKAGA--------SLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTV-SPFDMVRTRLMNQPAD----AKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 525
            +P  ++KT L A    A A         + +A   +Y+ +G+ G +RG+   V R MV + T++A +   K  I  +       ++             + + +PFD++ TRL NQP D     ++Y GFVDC+LK+ A +G LGLY G  P++ R AP TTL +++++ ++
Sbjct:  140 SPAYLVKTHLQAQTVAAIAVGHQHNHQGMSSALVSIYRREGVCGLWRGVNGAVPRVMVGSATQLATFSSAKDWITHTQWFSPLSSLNTLCAAVMSGVAVSIIMTPFDVISTRLYNQPVDQFKQGRLYCGFVDCLLKVCAAEGVLGLYKGMTPVFVRLAPHTTLSMLLWDVLR 311          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKA-GASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQ----PADAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A      G  +GN  + +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + ++             A   +P D+VRTR+MNQ          YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQNSAVQGGMIGNFIS-IYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 54/166 (32.53%), Postives = 83/166 (50.00%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEGKA-GASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA--DAKV--YKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A      G  +GN  N +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +              A   +P D+VRTR+MNQ    D +   Y G +DC+L+    +G   LY GF P W R  P   +  V +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQSSTIQGGMIGNFMN-IYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLQDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIILFVTYEQLKKL 289          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   49 NPFDVLKTRLMA-SEGKAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQ----PADAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A S    G  +GN  N +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +              A   +P D+VRTR+MNQ          Y G +DC+L+    +G   LY GF P W R  P   +  V +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQSNTIQGGMIGNFMN-IYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKL 289          
BLAST of CX301043 vs. ExPASy Swiss-Prot
Match: KMCP1_XENLA (Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 53/166 (31.93%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   49 NPFDVLKTRLMASEG-KAGASLGNAANELYKAQGIKGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQ----PADAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 531
            NP DVLK R+ A      G  + N  N +Y+ +G +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +              A   +P D+VRTR+MNQ     A    YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  125 NPTDVLKIRMQAQGNVMQGGMIVNFIN-IYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRSIRDASNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKKL 289          
The following BLAST results are available for this feature:
BLAST of CX301043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCPB_DICDI1.716e-2232.75Mitochondrial substrate carrier family protein ucp... [more]
KMCP1_MOUSE3.348e-1831.52Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
UCP5_HUMAN7.459e-1832.72Brain mitochondrial carrier protein 1 OS=Homo sapi... [more]
KMCP1_XENTR7.459e-1832.53Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
UCP5_MOUSE1.272e-1732.10Brain mitochondrial carrier protein 1 OS=Mus muscu... [more]
S2534_DANRE2.170e-1730.81Solute carrier family 25 member 34 OS=Danio rerio ... [more]
KMCP1_RAT2.834e-1731.33Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
KMCP1_MACFA3.702e-1732.53Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]
KMCP1_HUMAN4.835e-1732.53Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]
KMCP1_XENLA6.314e-1731.93Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionC08005B02SK PhyRootSw1 Citrus sinensis cDNA clone C08005B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301043 ID=CX301043; Name=CX301043; organism=Citrus sinensis; type=EST; length=722bp
CTCGTGCCGAATTCGGCACGAGGTGGTGCTATTGGATCCATCGCTGGCAA
TCCTTTCGACGTCCTGAAGACTAGATTAATGGCTTCTGAAGGCAAAGCTG
GTGCTTCATTAGGAAATGCTGCTAATGAATTATACAAAGCTCAGGGTATC
AAAGGATTTTACCGAGGTTTGGAAGCTAACGTCATGAGAGCAATGGTTCT
TAACGGTACTAAGATGGCTTGTTACGATCAGATCAAGGGTATCATCAAGG
GTAGTGGACTTGTCAAGAATGAGCTCGCAGTTCAATTCTTCTCAGCCTTT
GGTGCTGGTTTCTTCATGGCCACCACAGTTTCTCCATTTGACATGGTCCG
AACAAGACTCATGAATCAACCAGCTGATGCTAAAGTCTACAAGGGCTTCG
TTGATTGCATACTTAAGATTATCGCAAAGGATGGACCTTTGGGATTATAC
GCTGGTTTCATTCCAATCTGGGCAAGATTTGCACCAACAACAACATTACA
ACTAGTTATTTTCGAGCAAATCAAGCCAATCTTCGGTGTCGAAGGAAATG
GTGAATAAACATTTTACAATCGAATTACCACAGATAATGAGAATATTCGA
CGAGCTCATTTACCCTACTCACCTCAAATATTTTCCAATTTTGTTAATTC
CCTTTAGTTTTGTACTTCCCAATACCTCTACATCCCTCGCCCACAAATAG
ATAGTTTAGATAAGTTCTACGC
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