CX301036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 203.371 bits (516), Expect = 8.748e-52 Identity = 93/130 (71.54%), Postives = 115/130 (88.46%), Query Frame = 2 Query: 209 GTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAII 598 G KFR+S LPVAA +NC+DNTGA+NLY+I+V GI+GRLNRLP+A +GDMV+A+VK+GKP+LRKKVL AVI+RQRK WRRKDG +YFEDNAGVIVNPKGEMKGS I+GP+ KE ADLWP++++ A AI+ Sbjct: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.492e-51 Identity = 101/141 (71.63%), Postives = 124/141 (87.94%), Query Frame = 2 Query: 182 MGGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKG-EMKGSGISGPVAKESA-DLWPKVSTHAPAII 598 MG + A+V+G +FR+S ALPV AV+NC+DNTGA+NLY+I+V G GRLNRLPAAALGD+V+ASVK+GKPELR+KVLNAVIIRQRKSWRRKDGTV+YFEDNAGVIVN +G + + SGI+GPVAKE+ PK+S+HAPAI+ Sbjct: 1 MGKEKANVKGCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPSGPKISSHAPAIV 141
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 1.949e-51 Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 2 Query: 182 MGGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAII 598 M G A +GTKFRIS LPV A+MNC+DN+GARNLY+IAV G RLNRLPAA+LGDMV+A+VK+GKPELRKKV+ A+++RQ KSWRR+DG LYFEDNAGVI NPKGEMKGS I+GPV KE ADLWP+V++++ ++ Sbjct: 1 MSGNGA--QGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.342e-51 Identity = 99/137 (72.26%), Postives = 118/137 (86.13%), Query Frame = 2 Query: 185 GGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAI 595 GG S G KFRIS LPV AV+NC+DNTGA+NLY+I+V GI+GRLNRLPAA +GDMV+A+VK+GKPELRKKV AV+IRQRKS+RRKDG LYFEDNAGVIVN KGEMKGS I+GPVAKE ADLWP+++++A +I Sbjct: 7 GGSS----GAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301036 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.672e-51 Identity = 93/141 (65.96%), Postives = 119/141 (84.40%), Query Frame = 2 Query: 176 VSMGGKSASVRGTKFRISKALPVAAVMNCSDNTGARNLYVIAVSGIRGRLNRLPAAALGDMVLASVKRGKPELRKKVLNAVIIRQRKSWRRKDGTVLYFEDNAGVIVNPKGEMKGSGISGPVAKESADLWPKVSTHAPAII 598 +S G+ S G KFR+S LPVAA +NC+DNTGA+NLY+I+V GI+GRLNRLP+A +GDMV+A+VK+GKP+LRKKV+ AV++RQRK WRRKDG +YFEDNAGVIVN KGEMKGS I+GP+ KE ADLWP++++ A AI+ Sbjct: 1 MSKRGRGGSA-GNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140 The following BLAST results are available for this feature:
BLAST of CX301036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301036 ID=CX301036; Name=CX301036; organism=Citrus sinensis; type=EST; length=657bpback to top |