CX301030

Overview
NameCX301030
Unique NameCX301030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1089 contig Csv1_Contig1089:398..977. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.259e-94
Identity = 167/181 (92.27%), Postives = 174/181 (96.13%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNK LNGEVGPKTVH+PTGEKLYVFDAA++YK+ GH+TIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA +LGL GHERYTI+LP  VSEIR
Sbjct:  672 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTVHVPTGEKLYVFDAALKYKSEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERYTIDLPTNVSEIR 852          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 1.634e-90
Identity = 162/181 (89.50%), Postives = 174/181 (96.13%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIR+VNKLL+GEVGPKTVH+PTGEKL VF+AA +YK+AG +TIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA +LGL GHERYTI+LP+ +S+IR
Sbjct:  672 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRLVNKLLDGEVGPKTVHVPTGEKLSVFEAAEKYKSAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADSLGLTGHERYTIDLPDDISKIR 852          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_SOLTU (Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.135e-90
Identity = 159/181 (87.85%), Postives = 172/181 (95.03%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAGSIHKDSPAA+YL+ERGVDR+DFNSYGSRRGNDE+MARGTFANIR+VNKLLNGEVGPKTVH+P+GEKL VFDAAM+YK+AG  TI+LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGI+PLCFK GEDA TLGL G ERYTI+LP  +SEIR
Sbjct:  390 LLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHVPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIR 570          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 6.211e-90
Identity = 160/181 (88.40%), Postives = 172/181 (95.03%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAG+I KDSPAAK+L+ERGVDRKDFNSYGSRRGNDE+MARGTFANIRIVNKL+NGEVGPKTVHIP+GEKL VFDAAMRYK++G +TI+LAGAEYGSGSSRDWAAKGPML GVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA TLGL GHERYTI+LP  +SEIR
Sbjct:  764 LLNFGDSITTDHISPAGNIQKDSPAAKFLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLMNGEVGPKTVHIPSGEKLSVFDAAMRYKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIHLPTDISEIR 944          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 1.998e-88
Identity = 159/181 (87.85%), Postives = 168/181 (92.82%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAGSIHKDSPAAKYL+ERGVDR+DFNSYGSRRGNDE+MARGTFANIRIVNK L GEVGPKTVHIPTGEKL VFDAAM+Y+  G +TI+LAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK GEDA TLGL G E YTI LPN VSEI+
Sbjct:  672 LLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIK 852          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 1.340e-84
Identity = 152/181 (83.98%), Postives = 165/181 (91.16%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDS+TTDHISPAG+I K SPAAK+L++RGV  +DFNSYGSRRGNDEVMARGTFANIRIVNKLL GEVGP TVHIPTGEKL VFDAA +YK A  +TI+LAGAEYGSGSSRDWAAKGP+LLGVKAVIAKSFERIHRSNL GMGIIPLCFK GEDA TLGL GHERYT++LP KVS+IR
Sbjct:  769 LLNFGDSVTTDHISPAGNIQKTSPAAKFLMDRGVISEDFNSYGSRRGNDEVMARGTFANIRIVNKLLKGEVGPNTVHIPTGEKLSVFDAASKYKTAEQDTIILAGAEYGSGSSRDWAAKGPLLLGVKAVIAKSFERIHRSNLAGMGIIPLCFKAGEDAETLGLTGHERYTVHLPTKVSDIR 949          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.197e-78
Identity = 150/184 (81.52%), Postives = 160/184 (86.96%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMAR---GTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVSEIR 578
            LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDR+DFNSYG       VM R     FANIRIVNKLL GEVGPKT+HIP+ EKL VFDAAMRYK+ G +TI+LAGAEYG GSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA +LGL GHER+TI+LP+ V EIR
Sbjct:  537 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRRDFNSYGVA----VVMMRLWHVHFANIRIVNKLLKGEVGPKTIHIPSREKLSVFDAAMRYKSEGQDTIILAGAEYGIGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFTIDLPSNVGEIR 716          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 3.204e-70
Identity = 128/177 (72.32%), Postives = 151/177 (85.31%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKV 566
            LLNFGDS+TTDHISPAG+I ++SPAA+YL  RG+  ++FNSYGSRRGND VMARGTFANIR+VNK ++ + GP+T+H P+GE L VFDAA RYK AGH  IVLAG EYG+GSSRDWAAKGP LLGVKAV+A+S+ERIHRSNLVGMG+IPL + PGEDA TLGL G ERYTI +P  +
Sbjct:  668 LLNFGDSVTTDHISPAGNIARNSPAARYLTSRGLTPREFNSYGSRRGNDAVMARGTFANIRLVNKFIDKQ-GPQTIHFPSGETLDVFDAAERYKQAGHPLIVLAGKEYGAGSSRDWAAKGPFLLGVKAVLAESYERIHRSNLVGMGVIPLQYLPGEDARTLGLTGRERYTIIIPENL 843          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 1.944e-67
Identity = 124/174 (71.26%), Postives = 148/174 (85.06%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLP 557
            LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  ++FNSYGSRRGND +MARGTFANIR++NK LN +  P+TVH+P+GE L VFDAA RY+ AG   IVLAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE A +LGL G ERYTIN+P
Sbjct:  668 LLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQA-PQTVHLPSGETLDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGETADSLGLTGRERYTINIP 840          
BLAST of CX301030 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 4.331e-67
Identity = 121/178 (67.98%), Postives = 150/178 (84.27%), Query Frame = 3
Query:   36 LLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAAGHETIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAHTLGLAGHERYTINLPNKVS 569
            LLN GDS+TTDHISPAG+I ++SPAA+YL  RG+  ++FNSYGSRRGND +MARGTFANIR++N+ LN +  P+T+H+P+GE L VFDAA RY+  GH  IVLAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A +LGL G ERYTI +P  ++
Sbjct:  668 LLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNRFLNKQA-PQTIHLPSGETLDVFDAAERYQQEGHPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADSLGLTGRERYTIIIPENLT 844          
The following BLAST results are available for this feature:
BLAST of CX301030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ACOC_ORYSJ9.259e-9492.27Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACOC_CUCMA1.634e-9089.50Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACOC_SOLTU2.135e-9087.85Aconitate hydratase, cytoplasmic (Fragment) OS=Sol... [more]
ACO2M_ARATH6.211e-9088.40Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACO1_ARATH1.998e-8887.85Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACO3M_ARATH1.340e-8483.98Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_CUCMC3.197e-7881.52Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
ACOC_CHICK3.204e-7072.32Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
ACOC_MOUSE1.944e-6771.26Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]
ACOC_RABIT4.331e-6767.98Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]

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Properties
Property NameValue
Genbank descriptionC08005A01SK PhyRootSw1 Citrus sinensis cDNA clone C08005A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301030 ID=CX301030; Name=CX301030; organism=Citrus sinensis; type=EST; length=580bp
CTCGTGCCGCCTCGTGCCGAATTCGGCACGAGGGCTTGCTCAATTTTGGT
GACAGTATTACTACCGATCACATCTCTCCGGCAGGAAGTATCCACAAGGA
CAGCCCTGCTGCAAAATATCTGCTTGAGCGTGGGGTGGATCGCAAGGACT
TCAATTCTTATGGTAGTCGTAGGGGTAATGATGAAGTGATGGCAAGGGGT
ACCTTTGCCAATATTCGCATTGTTAACAAGCTCTTGAATGGAGAAGTTGG
CCCAAAAACAGTTCATATTCCAACAGGAGAGAAGCTTTATGTTTTTGATG
CAGCAATGAGGTACAAGGCTGCTGGCCATGAGACCATTGTCCTAGCTGGA
GCAGAGTATGGAAGTGGCAGTTCTCGTGATTGGGCTGCTAAGGGTCCAAT
GCTTCTGGGTGTGAAAGCGGTGATTGCCAAGAGCTTTGAGAGAATTCATC
GTAGTAATCTTGTTGGTATGGGCATCATTCCTCTTTGCTTCAAGCCTGGG
GAGGATGCACACACACTGGGGTTAGCTGGTCATGAGCGCTACACAATCAA
CTTACCAAATAAAGTCAGTGAGATAAGGCC
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