CX300940

Overview
NameCX300940
Unique NameCX300940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_MARMS (FMN-dependent NADH-azoreductase OS=Marinomonas sp. (strain MWYL1) GN=azoR PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.098e-17
Identity = 43/99 (43.43%), Postives = 68/99 (68.69%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M +LL I +S  G NS+SR +A+EF++ +  K+ + KV+ +D+ A+P+PH  GET+GA + PEE R+A Q+A   +  +LI E+   D +IVS PM+N+
Sbjct:    1 MATLLRIDSSASGENSKSRQLANEFVEKWLAKNPEGKVVARDVTANPLPHFTGETLGALFTPEENRTAEQQAIVAIGDELIAELEAADLVIVSAPMYNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_HERAR (FMN-dependent NADH-azoreductase OS=Herminiimonas arsenicoxydans GN=azoR PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.938e-14
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M  +L I++S +  +S SR V  EFI  ++ + ADA V+E+DL A P+PH+DG T+GA + P E R+  Q     L   L+ E+   D I++  PM+N+
Sbjct:    1 MTKILNINSSVRIGDSISRKVTTEFINKWKAREADAIVVERDLAAQPLPHIDGSTLGAFFTPAEQRTPEQAQIATLSETLVRELFDADVIVIGAPMYNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_FRAAA (FMN-dependent NADH-azoreductase OS=Frankia alni (strain ACN14a) GN=azoR PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.256e-13
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            MP+LL++ AS     S SR++A  +I A+R  H D  V  +DL   P PHLD  T+ A + P E  +  Q    +LR +LI E+   D++++S PM+N+
Sbjct:    1 MPNLLHVDASLAQEGSTSRSLAATYIDAWRAAHPDGTVTYRDLALTPPPHLDWATLSAAFTPPEQHTPEQTEGVKLREELIGELEAADELLLSLPMYNY 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR2_RALEJ (FMN-dependent NADH-azoreductase 2 OS=Ralstonia eutropha (strain JMP134) GN=azoR2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.798e-13
Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            MP LLY+S SP+  NS SR      I     +H    VI++DL A P+PH+DG    A  +P   R  ++ A   L   LI E+   D +++STPM N+
Sbjct:    1 MPKLLYLSVSPRAENSYSRQAGARMIAWLERRHGPLTVIDRDLAADPVPHIDGAMARASLMPAADRGPAEHAALALSETLIGELEAADIVLISTPMHNF 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_FRASC (FMN-dependent NADH-azoreductase OS=Frankia sp. (strain CcI3) GN=azoR PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            MP LL++ +S    +S SR++A  F +A+RE H D  +  +DL+  P PHLD  T+ A + P E  SA Q    +   +LI E+   D+ ++S PM+N+
Sbjct:    1 MPHLLHVDSSLATESSTSRSIATIFAEAWREAHPDGIITYRDLSVTPPPHLDWATVSARFTPPEQLSAEQAEAVKKGEELIAEVEAADEYLLSVPMYNY 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_FRASN (FMN-dependent NADH-azoreductase OS=Frankia sp. (strain EAN1pec) GN=azoR PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.001e-12
Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            MP LL+I +S     S SR VA+ + +++R+ H D  +  +DL   P PHL+   +  G  P E R+  Q    ++R + + E+   D+ ++S PM+N+
Sbjct:    1 MPHLLHIDSSLAPEGSVSRGVAEAYAESWRKHHPDGTLTHRDLATSPPPHLNWALVSGGQTPPEQRTPEQAEAVKIREEYLEEVESADEYVISVPMYNY 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR8_BURS3 (FMN-dependent NADH-azoreductase 8 OS=Burkholderia sp. (strain 383) GN=azoR8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.001e-12
Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            MP+LL + ASP+G  S SR +   F+  ++ +  D +VI++DL A  +P +    +GA + P E ++   K   +L  +L+ EI+  D I++ TP++N+
Sbjct:    1 MPTLLVVEASPRGEQSISRGLTKMFVNQWKREQHDGRVIQRDLMATDLPFVTMPWLGAYFTPPEHQTQDMKNLLRLSDELVAEILSADHIVIGTPVYNY 99          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR1_PSEAE (FMN-dependent NADH-azoreductase 1 OS=Pseudomonas aeruginosa GN=azoR1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11
Identity = 35/100 (35.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:  129 MPSLLYISASPQGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPE-EARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M  +L + ASP+G  S+SR +A+ F+ AYRE H  A+V  +++   P+P +    + A + P+ E RS + +A   L   L+ E+   D +++STPM+N+
Sbjct:    1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNF 100          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_STRCO (FMN-dependent NADH-azoreductase OS=Streptomyces coelicolor GN=azoR PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 3
Query:  129 MPSLLYISASPQGLN-SRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M +LL+I +S      S SR+V   F + + E+H +  VI +DL A P+PH+  +   AGY     RS  Q A    RL+LI E+   D I++  PM+N+
Sbjct:    1 MATLLHIDSSVFPAEASASRSVTAAFRRTWEEQHPEGTVIYRDLAAVPVPHITADAWSAGYADPSERSTRQSAAFAARLELIEELERADVILIGAPMYNY 100          
BLAST of CX300940 vs. ExPASy Swiss-Prot
Match: AZOR_STRAW (FMN-dependent NADH-azoreductase OS=Streptomyces avermitilis GN=azoR PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.467e-11
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  129 MPSLLYISASP-QGLNSRSRAVADEFIKAYREKHADAKVIEKDLNAHPIPHLDGETIGAGYVPEEARSASQKAKHQLRLDLINEIVGVDDIIVSTPMWNW 425
            M +LL+I +S      S SRAVA+ F  A++E+H D  VI +DL+A+P+PH+  +   AG+      +  Q A    R  LI E+   D +++  PM+N+
Sbjct:    1 MATLLHIDSSVFPSAASASRAVAETFRTAWQEQHPDGTVIYRDLSANPVPHITADAHTAGFADPATHTPGQAAAFAEREKLIAELEQADAVLIGAPMYNY 100          
The following BLAST results are available for this feature:
BLAST of CX300940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AZOR_MARMS1.098e-1743.43FMN-dependent NADH-azoreductase OS=Marinomonas sp.... [more]
AZOR_HERAR1.938e-1439.39FMN-dependent NADH-azoreductase OS=Herminiimonas a... [more]
AZOR_FRAAA1.256e-1338.38FMN-dependent NADH-azoreductase OS=Frankia alni (s... [more]
AZOR2_RALEJ2.798e-1338.38FMN-dependent NADH-azoreductase 2 OS=Ralstonia eut... [more]
AZOR_FRASC6.233e-1337.37FMN-dependent NADH-azoreductase OS=Frankia sp. (st... [more]
AZOR_FRASN9.001e-1232.32FMN-dependent NADH-azoreductase OS=Frankia sp. (st... [more]
AZOR8_BURS39.001e-1233.33FMN-dependent NADH-azoreductase 8 OS=Burkholderia ... [more]
AZOR1_PSEAE1.535e-1135.00FMN-dependent NADH-azoreductase 1 OS=Pseudomonas a... [more]
AZOR_STRCO2.005e-1137.00FMN-dependent NADH-azoreductase OS=Streptomyces co... [more]
AZOR_STRAW4.467e-1136.00FMN-dependent NADH-azoreductase OS=Streptomyces av... [more]

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Properties
Property NameValue
Genbank descriptionC08003H10SK PhyRootSw1 Citrus sinensis cDNA clone C08003H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300940 ID=CX300940; Name=CX300940; organism=Citrus sinensis; type=EST; length=426bp
CACACTCTCCGTCCTGTATCCAAATCCTTTAGATTCCTTCTATCAAGGAT
GCGCGAGATGAGAAAACTTGCAAAGAAACGGGAAGACAATACAATTTAAT
TGAAATCTTATCAGAGTTCAACAACAACATGCCAAGCCTTCTTTATATTT
CTGCTTCTCCTCAAGGACTTAATTCCCGCTCTCGCGCAGTGGCTGATGAG
TTCATCAAGGCTTATCGTGAGAAGCATGCTGATGCAAAGGTGATCGAGAA
GGACTTAAATGCCCATCCTATTCCTCACTTGGACGGCGAAACAATTGGAG
CTGGATATGTTCCAGAAGAAGCTCGCTCTGCATCCCAAAAAGCGAAGCAT
CAACTCCGTCTTGATTTGATCAATGAGATTGTCGGTGTTGATGATATCAT
TGTCAGCACTCCAATGTGGAACTGGG
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