CX300894

Overview
NameCX300894
Unique NameCX300894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length116
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:1004..1119. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300894 vs. ExPASy Swiss-Prot
Match: TRPD_ARATH (Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.949e-12
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 3 
Query:    3 LILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYN 116
            L+ DVT EKIE FSFDPLD+GIPRCTLE L+GGGP YN
Sbjct:  337 LVYDVTPEKIEEFSFDPLDFGIPRCTLEDLRGGGPDYN 374
The following BLAST results are available for this feature:
BLAST of CX300894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TRPD_ARATH8.949e-1278.95Anthranilate phosphoribosyltransferase, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionC08003D09SK PhyRootSw1 Citrus sinensis cDNA clone C08003D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300894 ID=CX300894; Name=CX300894; organism=Citrus sinensis; type=EST; length=116bp
GTCTGATCCTTGATGTCACCCAAGAAAAAATTGAGAGATTCTCATTTGAT
CCATTGGACTACGGCATTCCGCGCTGCACTTTAGAAAGCTTGCAAGGTGG
AGGCCCAGCATATAAT
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