CX300765
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.430e-64 Identity = 116/201 (57.71%), Postives = 157/201 (78.11%), Query Frame = -1 Query: 47 KRVVQGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADALKTNEDVKKLRDEVEAFAAAFPMPGK 649 +R +G I D D E +N AVFPS QGGPHEN IA +AVALKEA +P+F++Y QV++N+ + EEL KRGY L+T GT+NHLVLWDLRP +TGSK+EK + +I+VNKN+V+GDT+A+ PGGVR+G PALT+RGLKE++F K+V+FLD+ +KI+LDIQSK GK + DF A+ N+D+K++R EV+ F+ F MPG+ Sbjct: 281 RRDAKGNIIDD-DLENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKVGKKMPDFQRAIADNQDLKQIRQEVKEFSTKFGMPGE 480
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 7.556e-64 Identity = 121/202 (59.90%), Postives = 155/202 (76.73%), Query Frame = -1 Query: 50 GKRVV-QGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADALKTNEDVKKLRDEVEAFAAAFPMPG 652 GKRV GKEI +YD E +N AVFPSLQGGPHENVIA VAVALKEA + EFK+YA+QVKKNAA + L +GYKL+T GT+NHL+LWDLRP LTG+K EK + NI+VNKN+V GDT+A++PGG+RIG ALT+RGLKE +FEKI +FLD+ + I+L+IQ + GK L DF + ++++ LR EVE F++ F +PG Sbjct: 255 GKRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 213.001 bits (541), Expect = 1.094e-54 Identity = 107/199 (53.77%), Postives = 149/199 (74.87%), Query Frame = -1 Query: 50 GKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADAL----KTNEDVKKLRDEVEAFAAAFPMPG 634 G+EI Y FE+ +N AVFPSLQGGPH + IAAVAVALK+A TP F++Y++QV KNA +A+ L +RGY L++GGT+NHLVL DLRP L G++ E+ E V+I+ NKN+ GD SA+TPGG+R+G PALT+R +E +F ++V+F+D+G+ I L+++SK+ K L+DF L +T++ + LR VE FA AFPMPG Sbjct: 304 GREI-PYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTAK-LQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 500
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.436e-54 Identity = 108/199 (54.27%), Postives = 146/199 (73.37%), Query Frame = -1 Query: 50 GKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADAL----KTNEDVKKLRDEVEAFAAAFPMPG 634 G+EI Y FE+ +N AVFPSLQGGPH + IAAVAVALK+A TP F++Y++Q+ KNA +A L +RGY L++GGT+NHLVL DLRP L G++ E+ E V+I+ NKN+ GD SA+TPGG+R+G PALT+RG E +F K+V F+D+G+ I L+++SK+ K L+DF L +T+ + LR VE FA AFPMPG Sbjct: 304 GREI-PYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKTTK-LQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPG 500
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.209e-53 Identity = 106/201 (52.74%), Postives = 147/201 (73.13%), Query Frame = -1 Query: 50 QGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKS-GKMLKDFADALKTN----EDVKKLRDEVEAFAAAFPMPG 637 QGKE+ YDFE+ +NQAVFP LQGGPH + I +AVALK+A T E+K Y QV N+AK A+ L +RGY+L++GGT+NHLVL +L+P + GS++EK EAV+I+ NKN+V GD SA+ PGG+R+G PALT+RG E++F K+ E+ DK + IAL ++S++ G LKDF A++++ ++ KLR EVE FA FP G Sbjct: 308 QGKEVL-YDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIG 507
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.063e-53 Identity = 105/199 (52.76%), Postives = 148/199 (74.37%), Query Frame = -1 Query: 50 GKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADAL----KTNEDVKKLRDEVEAFAAAFPMPG 634 G+EI Y FE+ +N AVFPSLQGGPH + IAAVAVALK+A TP F++Y++QV KNA +A+ L +RGY L++GGT+NHLVL DLRP L G++ E+ E V+I+ NKN+ GD SA+TPGG+R+G PALT+R +E +F ++V+F+D+G+ I L+++ K+ K L+DF L +T++ + LR V+ FA AFPMPG Sbjct: 304 GQEI-PYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAK-LQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPG 500
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.478e-51 Identity = 100/201 (49.75%), Postives = 146/201 (72.64%), Query Frame = -1 Query: 50 QGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKS-GKMLKDFADALKTN----EDVKKLRDEVEAFAAAFPMPG 637 QGKE+ YD+E+ +NQAVFP LQGGPH + I +AVALK+A TPE++ Y QV N++K A+ L+++GY L++GGTENHLVL +L+ + GS++EK E V+I+ NKN+V GD SA+ PGG+R+G PALT+RG E++F K+ E+ D + +AL ++++S G LKDF +AL+T+ ++ KL+ +VE FA FP G Sbjct: 309 QGKEVF-YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIG 508
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.478e-51 Identity = 103/200 (51.50%), Postives = 143/200 (71.50%), Query Frame = -1 Query: 50 QGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKS-GKMLKDFADALKTN---EDVKKLRDEVEAFAAAFPMPG 637 QGKE+ YD+E+ +NQAVFP LQGGPH + I +AVALK+A T E+K Y QV N+AK AE L K GY+L++GGTENHLVL +L+ + GSK+EK EAV+I+ NKN+V GD SA+ PGG+R+G PALT+RG E++F K+ F D +K+A+ I+ ++ G LKDF A++++ ++ KLR +VE +A FP G Sbjct: 309 QGKEVF-YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIG 507
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.134e-50 Identity = 98/201 (48.76%), Postives = 146/201 (72.64%), Query Frame = -1 Query: 50 QGKEIGDYDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKS-GKMLKDFADALKTNEDVK----KLRDEVEAFAAAFPMPG 637 QGKE+ YD+E+ +NQAVFP LQGGPH + I +AVALK+A TPE++ Y QV N++K A+ L ++GY+L++GGT+NHLVL +++ + GS++EK EAV+I+ NKN+V GD SA+ PGG+R+G PALT+RG E++F K+ +F D +KIA+ +++++ G LKDF L+++ +K KLR +VE +A FP G Sbjct: 309 QGKEVF-YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIG 508
BLAST of CX300765 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 2.134e-50 Identity = 100/206 (48.54%), Postives = 137/206 (66.50%), Query Frame = -1 Query: 50 GKRVVQGKEIGD-YDFEETVNQAVFPSLQGGPHENVIAAVAVALKEAMTPEFKDYAVQVKKNAAKLAEELTKRGYKLMTGGTENHLVLWDLRPLALTGSKMEKFYEAVNISVNKNSVFGDTSALTPGGVRIGVPALTTRGLKEKEFEKIVEFLDKGIKIALDIQSKSGKMLKDFADALKTNE----DVKKLRDEVEAFAAAFPMPG 652 G R V K + YD EE +N AVFP LQGGPH + IA +AVALK+ ++ +F Y Q+ KNA LAE L K GY L TGGT+NHL+L DLRP+ + G++ E + +I+ NKN+ GD SAL PGG+R+G PALT+RG KE++FEK+ +F+ +G++IA +++GK LKDF TNE +V +L VE F+ F +PG Sbjct: 302 GVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQCLSEDFVQYGEQILKNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507 The following BLAST results are available for this feature:
BLAST of CX300765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300765 ID=CX300765; Name=CX300765; organism=Citrus sinensis; type=EST; length=652bpback to top |