CX300760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300760 vs. ExPASy Swiss-Prot
Match: CA128_MOUSE (UPF0424 protein C1orf128 homolog OS=Mus musculus GN=Trp26 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 46/152 (30.26%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 111 WNLYAMLDVNETRALNVTQPSDVIGIFKPHVLRLQEEPRLXXXXXXXXXXXXRFTSPVSLRRLMIIGGGEEQHHPSQVRCYVNTDLIDFNNVEDFVPAQTFNLPVNPIGVVELTTVLQPFTNIQTVAFYFPQNHGEQDTTIIKYIGMQGEHT 566 + LY +D+ + LN ++ G+FKP R + FT V L+ ++I+G ++ H PS++R Y N + F++ E P QTF+L + G +E T + F+N+ ++ + +N G DTT I YIG++GE T Sbjct: 29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGVIIMGEDDDSH-PSEMRLYKNIPQMSFDDTER-EPEQTFSLNRDITGELEYATKISRFSNVYHLSIHISKNFG-ADTTKIFYIGLRGEWT 177
BLAST of CX300760 vs. ExPASy Swiss-Prot
Match: CA128_HUMAN (UPF0424 protein C1orf128 OS=Homo sapiens GN=C1orf128 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.949e-12 Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 111 WNLYAMLDVNETRALNVTQPSDVIGIFKPHVLRLQEEPRLXXXXXXXXXXXXRFTSPVSLRRLMIIGGGEEQHHPSQVRCYVNTDLIDFNNVEDFVPAQTFNLPVNPIGVVELTTVLQPFTNIQTVAFYFPQNHGEQDTTIIKYIGMQGEHT 566 + LY +D+ + LN ++ G+FKP R + FT V L+ ++I+G ++ H PS++R Y N + F++ E P QTF+L + G +E T + F+N+ ++ + +N G DTT + YIG++GE T Sbjct: 29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDSH-PSEMRLYKNIPQMSFDDTER-EPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFG-ADTTKVFYIGLRGEWT 177
BLAST of CX300760 vs. ExPASy Swiss-Prot
Match: CA128_DANRE (UPF0424 protein C1orf128 homolog OS=Danio rerio GN=zgc:77241 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 45/172 (26.16%), Postives = 82/172 (47.67%), Query Frame = 3 Query: 51 HGSGMIGSTHSHDTRYPDDNWNLYAMLDVNETRALNVTQPSDVIGIFKPHVLRLQEEPRLXXXXXXXXXXXXRFTSPVSLRRLMIIGGGEEQHHPSQVRCYVNTDLIDFNNVEDFVPAQTFNLPVNPIGVVELTTVLQPFTNIQTVAFYFPQNHGEQDTTIIKYIGMQGEHT 566 HG G H R + + LY +D+ + + LN ++ D +FKP R + FT V L+ + II G +++ HP+++R + N + F++ P Q F L +P +E T + F+N++ ++ + +N G + T + YIG++GE+T Sbjct: 10 HGHGCCECEHEPAERGVE--YELYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTDRNKFVESDADEELLFNIPFTGSVKLKGI-IISGEDDESHPAEIRLFKNIPQMSFDDTSR-EPEQAFRLNRDPRAELEYPTKIARFSNVEHLSIHVSRNFGAESTRVY-YIGLRGEYT 176
BLAST of CX300760 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11 Identity = 50/183 (27.32%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 48 PHGSGMIGSTHSHDTRYPDD------NWNLYAMLDVNETRALNVTQPSDVIGIFKPHVLRLQEEPRLXXXXXXXXXXXXRFTSPVSLRRLMIIGGGEEQHHPSQVRCYVNTDLIDFNNVEDFVPAQTFNLPVNPIGVVELTTVLQPFTNIQTVAFYFPQNHGEQDTTIIKYIGMQGEHT--HY 572 PHG SH+ D ++LY +D++ LN +FKP+ R + FT + L+ + II G + HP+ V+ + N + F++ P Q F L + G +E + + F+++ ++ YFP N GE D T I YIG++GE T HY Sbjct: 2 PHGHSHDHGGCSHEASDVDHALEMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLSKYVESDADEELLFNIPFTGNIKLKGI-IISGANDDSHPNMVKIFKNRPRMTFDDARA-KPDQEFQLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGE-DITRIYYIGLRGEFTEAHY 181 The following BLAST results are available for this feature:
BLAST of CX300760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300760 ID=CX300760; Name=CX300760; organism=Citrus sinensis; type=EST; length=573bpback to top |