CX300759

Overview
NameCX300759
Unique NameCX300759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4963 contig Csv1_Contig4963:1..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 6.578e-58
Identity = 111/156 (71.15%), Postives = 125/156 (80.13%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANWSFAAIE           LYN+IFYIPLDFIKFFIRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APDTKMF++    +ELNQM               L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct:  805 LAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.499e-57
Identity = 108/156 (69.23%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANWSFAAIE           +YNL+FYIPLD IKFFIRYALSG+AWDLV E+RIAFTRKKDFGKE+REL+WAHAQRTLHGL  PDTK+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct:  802 IAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYNLVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTKLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.714e-56
Identity = 108/156 (69.23%), Postives = 121/156 (77.56%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANWSFAAIE           LYN++FYIPLD IKF IRYALSG+AWDLVIEQR+AFTR+KDFGKE+REL+WAHAQRTLHGL APD KMF E   F EL+QM               L+TLKGHVESVVRLKGLDI+TIQQ+YTV
Sbjct:  801 LAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.050e-55
Identity = 108/156 (69.23%), Postives = 120/156 (76.92%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            VAQL+ATLIAVYA+WSFAAIE           LYNL+FY PLD IKF IRYALSG+AWDLV+EQRIAFTRKKDFGKE+REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct:  549 VAQLVATLIAVYASWSFAAIEGIGWGWAGVIWLYNLVFYFPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIKLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.056e-55
Identity = 107/156 (68.59%), Postives = 119/156 (76.28%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANWSFAAIE           LYN++FYIPLD   F IRYALSGKAWDLVIEQRIAFTRKKDFGKE+REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQ+YTV
Sbjct:  801 IAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.056e-55
Identity = 109/156 (69.87%), Postives = 119/156 (76.28%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            VAQL+ATLIAVYANWSFAAIE           LYN++ YIPLD IKF IRYALSGKAWDLV+EQRIAFTRKKDFGKE REL+WAHAQRTLHGL  PD K+FSE   F ELNQ+               L+TLKGHVESVV+LKGLDI+TIQQSYTV
Sbjct:  801 VAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVTYIPLDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.222e-44
Identity = 87/157 (55.41%), Postives = 113/157 (71.97%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD-TKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANW+FA ++           LY++IFY+PLD +KF IRY LSGKAW+ +++ + AFT KKD+GKEERE +WA AQRTLHGL  P+ T +F+E N + EL+++               L+TLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct:  796 IAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.683e-43
Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPD---TKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+AT +AVYANW FA I+           LY+++FY PLD  KFFIR+ LSG+AWD ++E +IAFT KKD+G+EERE +WA AQRTLHGL  P+     +F++ + + EL+++               LNTLKGHVESVV+LKGLDIDTIQQ+YTV
Sbjct:  793 LAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 4.577e-43
Identity = 90/157 (57.32%), Postives = 108/157 (68.79%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLH-APDTKMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+AT IAVYANWSFA IE           LY+ + YIPLD +KF IRY LSGKAW  ++E + AFT KKD+GKEERE +WA AQRTLHGL  A    +F+E N ++EL+Q+               +NTLKGHVESVV+LKGLDIDTIQQ YTV
Sbjct:  793 IAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949          
BLAST of CX300759 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.595e-41
Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = 1
Query:    1 VAQLIATLIAVYANWSFAAIEXXXXXXXXXXXLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHAPDT---KMFSEHNKFTELNQMXXXXXXXXXXXXXXXLNTLKGHVESVVRLKGLDIDTIQQSYTV 468
            +AQL+ATLIAVYANW FA I+           L++++FY PLD  KFFIR+ LSG+AWD +++ + AFT K+++GK ERE +WA AQRTLHGL AP+     +F++ + + EL+++               LNTLKGHVESVV+LKGLDIDTI Q+YTV
Sbjct:  793 LAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFVLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951          
The following BLAST results are available for this feature:
BLAST of CX300759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PMA4_ARATH6.578e-5871.15ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_NICPL9.499e-5769.23Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA11_ARATH4.714e-5669.23ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA2_SOLLC1.050e-5569.23Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc... [more]
PMA3_NICPL3.056e-5568.59Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_SOLLC3.056e-5569.87Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA4_NICPL9.222e-4455.41Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA1_ORYSJ2.683e-4353.46Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA5_ARATH4.577e-4357.32ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_WHEAT5.595e-4151.57Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]

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Properties
Property NameValue
Genbank descriptionC08001H09SK PhyRootSw1 Citrus sinensis cDNA clone C08001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300759 ID=CX300759; Name=CX300759; organism=Citrus sinensis; type=EST; length=590bp
GTTGCTCAGCTGATTGCTACACTGATTGCTGTCTATGCGAACTGGAGCTT
TGCTGCAATTGAAGGAGTTGGATGGGGTTGGGCTGGTGTGGTCTGGCTTT
ACAATCTCATCTTCTACATCCCACTTGATTTTATTAAGTTCTTCATCAGA
TATGCTTTGAGCGGGAAGGCGTGGGATCTTGTCATTGAGCAAAGGATTGC
CTTCACAAGGAAGAAGGATTTTGGTAAAGAAGAACGTGAGCTTAAATGGG
CACATGCACAGAGAACCCTCCACGGGTTACACGCACCTGATACAAAGATG
TTCAGTGAACACAACAAGTTCACAGAACTTAACCAGATGGCTGAAGAGGC
AAAACGAAGAGCTGAGATTGCAAGATTGAGAGAACTGAATACTCTGAAAG
GGCATGTTGAATCAGTGGTTAGGCTGAAAGGTCTGGATATCGACACGATT
CAGCAATCTTATACCGTCTGATAGAGATCATACATGAACATGGAAACATA
TGTTGTAGTTGAGAACTGATATTAAAGCCACATAAATTATCATCCTAATG
TATAAGCCTTTAGTCCACCTGTATTTATTATATCATCATC
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