CX300755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 2 Query: 5 EKDKSLLVVKTPNAVNPLVWD-YSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKAPAT 220 ++D L+V+K+PNAVNPLVW Y LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 174 DEDNKLVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 2 Query: 8 KDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 211 ++K L +VKTPNA NPLV Y+ LLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL+ A A Sbjct: 135 EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 104.375 bits (259), Expect = 3.630e-22 Identity = 51/67 (76.12%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 211 ++ L VVKTPNAVNPLV LLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE AKA Sbjct: 143 NEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 5 EKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 + D +L + KT N VNPL + ++LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 137 DSDGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15 Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 17 SLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 +L V KTPNA NPLV LLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 138 TLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 4.298e-15 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 17 SLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 205 +L V KT NA NP+ + LLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L A Sbjct: 137 TLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.633e-14 Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 2 Query: 17 SLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 211 +L + KT NA P+ + LLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S A A Sbjct: 137 TLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 2 Query: 17 SLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 178 +L V KTPNA NPL +LLT+DVWEHAYY+DF+N RP +I ++D LV+W+ Sbjct: 138 TLKVTKTPNAENPLAHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWD 191
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 2 SEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 205 S K+ L + KTPN NPLV + +L +DVWEH+YY+D++N RP Y+ F+D L++W+ V + E A Sbjct: 131 SVKNGKLEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYEAA 198
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 208 D L + TPN PL+ + +L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V+KR AK Sbjct: 138 DGKLEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAKRYNEAK 202 The following BLAST results are available for this feature:
BLAST of CX300755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300755 ID=CX300755; Name=CX300755; organism=Citrus sinensis; type=EST; length=540bpback to top |