EY702453

Overview
NameEY702453
Unique NameEY702453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4309 contig Csv1_Contig4309:44..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 2.596e-101
Identity = 188/225 (83.56%), Postives = 199/225 (88.44%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSS---APPETGTVDDGSSPLEPQVAP 670
            A  ESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+G+ISTGAQNDLEKVTKMTYAQVAVYGFS+K+GLLSFPQRED  E SKPYS++TGA+ID EVREWVGKAY RTV+LIEEHKE VAQIAELLLEKEVLHQDDL +VLGERPFKS E TNYDRFK GFEE EK S   + P     DDG  PLEPQV P
Sbjct:  590 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQRED--EFSKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGERPFKSGETTNYDRFKSGFEESEKESQKESVPVKPVEDDGIPPLEPQVVP 812          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.870e-100
Identity = 184/225 (81.78%), Postives = 200/225 (88.89%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSA--PPETGTVDDGS-SPLEPQVAP 670
            A  ESGHAV GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+GKISTGAQNDLEKVTKMTYAQVAVYGFS+KVGLLSFP R+D ++ SKPYS+KTGAIID EVR+WV KAY RTV+L+EEHK  VA+IAELLLEKEVLHQDDLL++LGERPFKS+E+TNYDRFK GFEE EK SA  P     VDDG+  P EPQV P
Sbjct:  584 AYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGERPFKSAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPPFEPQVVP 808          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 5.067e-97
Identity = 178/224 (79.46%), Postives = 199/224 (88.84%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEE--KSSAPPETGTVDDGSSPLEPQVAP 670
            A  ESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAE+VL+G+ISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQR+D FEM+KPYS++T +IID EVREWVGKAY +TV+LI EHKE VA+IAE+LLEKEVLHQDDL+RVLGERPFK+SE TNYD FKQGF++EE  K+    +T   DD  +P   +V P
Sbjct:  598 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGERPFKASEPTNYDLFKQGFQDEEDSKNQEAAKTPQPDDDGTPSLGEVVP 821          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 5.602e-96
Identity = 176/214 (82.24%), Postives = 194/214 (90.65%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPETGTVDDGSS 646
            A  ESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN+NLL+TKEQLFDMTCMTLGGRAAE+VL+GKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRED FEMSKPYSS+T +IID EVREWV KAY +TV+LI++HK+ VAQIAELLLEKEVLHQDDL++VLGERPFK+ E TNYDRFKQGF++E+ S+   E    D  SS
Sbjct:  583 AYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDGFEMSKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDLVQVLGERPFKTLEPTNYDRFKQGFQDED-SNRNAELSNADGASS 795          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.706e-52
Identity = 106/206 (51.46%), Postives = 144/206 (69.90%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 619
            A  E+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L TKEQL D  CMTLGGR +E++  G+I+TGAQ+DL KVT+  YAQ+  +G +EKVG +SF   R+    + KPYS  T  +ID EVR  +  AY RTV L+ E K  V ++A LLLEKEVL ++D++ +LG RPF  +E + Y+ F +G    ++ ++ PE
Sbjct:  572 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 774          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.229e-52
Identity = 106/206 (51.46%), Postives = 145/206 (70.39%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 619
            A  E+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L TKEQL D  CMTLGGR +E++  G+I+TGAQ+DL KVT+  YAQ+  +G +EKVG +SF   R+    + KPYS  T  +ID EVR  +  AY RTV L+ E K  V ++A LLLEKEVL ++D++++LG RPF  +E + Y+ F +G    ++ ++ PE
Sbjct:  571 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGPRPF--TEKSTYEEFVEGTGSLDEDTSLPE 773          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.801e-52
Identity = 105/206 (50.97%), Postives = 144/206 (69.90%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFP-QREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 619
            A  E+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L T+EQL D  CMTLGGR +E++  G+I+TGAQ+DL KVT+  YAQ+  +G +EKVG +SF   R+    + KPYS  T  +ID EVR  +  AY RTV L+ E K  V ++A LLLEKEVL ++D++ +LG RPF  +E + Y+ F +G    ++ ++ PE
Sbjct:  573 AYHEAGHAVAGWYLEHADPLLKVSIIPRGKG-LGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPF--AEKSTYEEFVEGTGSLDEDTSLPE 775          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 106/207 (51.21%), Postives = 145/207 (70.05%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLS--FPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 619
            A  E+GHAV GWFLEHA+PLLKV+I+PRG   LG+AQY+P E  L T+EQLFD  CM LGGR AEQ+  G+I+TGAQ+DL KVT+  YAQ+  +G SEK+G +S  FP++ +T  + KPYS  T  +ID EVR  V  AY RT++L+ + +E V ++   LLEKEVL + D++ +LG RPF  +E + Y+ F +G    E+ ++ PE
Sbjct:  564 AYHEAGHAVVGWFLEHADPLLKVSIIPRGKG-LGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGETM-VEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIELLGPRPF--AEKSTYEEFVEGTGSLEEDTSLPE 766          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.470e-43
Identity = 86/198 (43.43%), Postives = 141/198 (71.21%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEE 598
            A  E+GHAV GW+L++A+PLLKV+I+PRG  ALG+AQY+P +  LLT++QL D   M+LGGR +E++    +++GA +D +KVT M  A V   G S+K+G +++ +R+D+ +++KP+S +TG IID+EV   V + + R  +L++E  E V +IA++LL+KEVL ++D++ +LG+RPF       +D++   +E E+
Sbjct:  611 AYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTELGMSDKIGWVNYQKRDDS-DLTKPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDLLGKRPFPERN-DAFDKYLNDYETEK 806          
BLAST of EY702453 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.726e-41
Identity = 84/205 (40.98%), Postives = 135/205 (65.85%), Query Frame = 2
Query:    5 ASDESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDTFEMSKPYSSKTGAIIDAEVREWVGKAYVRTVQLIEEHKEHVAQIAELLLEKEVLHQDDLLRVLGERPFKSSELTNYDRFKQGFEEEEKSSAPPE 619
            A  E+GHAV GWFL++A+PLLKV+I+PRG  ALG+AQY+P +  L+++EQ      M LGGR +E++    +++GA +D +KVT+M  A V   G S K+G LSF Q +  F+++KP+S+KT   ID EV+  V  A+    +L+ ++ + V  +A+ LL KE + ++D++R+LG RPFK       + F++ + + + ++ PPE
Sbjct:  556 AYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLGPRPFKERN----EAFEK-YLDPKSNTEPPE 755          
The following BLAST results are available for this feature:
BLAST of EY702453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FTSHA_ARATH2.596e-10183.56Cell division protease ftsH homolog 10, mitochondr... [more]
FTSH3_ARATH2.870e-10081.78Cell division protease ftsH homolog 3, mitochondri... [more]
FTSH8_ORYSJ5.067e-9779.46Cell division protease ftsH homolog 8, mitochondri... [more]
FTSH3_ORYSJ5.602e-9682.24Cell division protease ftsH homolog 3, mitochondri... [more]
AFG32_HUMAN1.706e-5251.46AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
AFG32_MOUSE2.229e-5251.46AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1... [more]
AFG32_BOVIN3.801e-5250.97AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]
AFG31_MOUSE1.887e-5151.21AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2... [more]
RCA1_YEAST2.470e-4343.43Mitochondrial respiratory chain complexes assembly... [more]
AFG3_YEAST6.726e-4140.98Mitochondrial respiratory chain complexes assembly... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702453 ID=EY702453; Name=EY702453; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGATGAATCCGGCCATGCTGTTGCTGGATGGTTTCTGGAAC
ATGCAGAACCCTTGTTAAAAGTGACAATTGTTCCTCGAGGGACAGCTGCA
CTTGGATTTGCCCAGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGA
GCAGCTTTTTGATATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGC
AGGTTTTGTTGGGGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAG
GTAACAAAGATGACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGAAAA
GGTTGGTCTCTTGTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTA
AGCCATACAGTAGCAAGACTGGGGCAATCATAGATGCCGAGGTTCGAGAA
TGGGTAGGCAAGGCATATGTACGCACAGTCCAACTTATTGAGGAACACAA
AGAGCATGTAGCTCAGATTGCCGAGTTATTGCTTGAAAAGGAAGTTCTTC
ACCAAGATGATCTGCTTCGAGTTCTGGGTGAACGGCCATTCAAATCCAGT
GAGCTCACAAATTATGACAGATTCAAGCAAGGTTTCGAAGAGGAAGAGAA
GAGCTCAGCGCCCCCAGAGACTGGAACCGTGGATGATGGTTCTTCACCAC
TCGAGCCTCAGGTTGCTCCGGCATGAGAAACCATGTAGGTTAAATGTTTG
TAATTCATACTTGAGATGATTTTTTCTTTTTTTTTCCCCGCCCGGTGGGA
TTAGGGTACTCTGGAATTTGTAATCATATTCATAGGGGTCCATTTTTATT
TTAATTTATCCCTAGGATCTTTCTGACGGATGAAGTCTCTATTTGTCAAT
TTGTAGACCCCGAGTTAGGCTGTTTTATTGACGT
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