CX300749

Overview
NameCX300749
Unique NameCX300749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_RAT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_RABIT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Oryctolagus cuniculus GN=CAMK2D PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_PIG (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Sus scrofa GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Homo sapiens GN=CAMK2D PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_CHICK (Calcium/calmodulin-dependent protein kinase type II delta chain OS=Gallus gallus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKITTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2D_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Bos taurus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE++ + H  GIVHRDLKPENLLL S++  + +K+ADFG A  ++
Sbjct:    9 RFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 165          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KC2D1_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 1 chain OS=Danio rerio GN=camk2d1 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.723e-34
Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F   Y L  ELG GAFSVV+  M + TGQ+ A KI++ KKLS  D+Q L  E +I   L H +I++L ++  E    Y+V +LV GGELF+ IVA+ +Y+E +A   I+ +LE + + H+MG+VHRDLKPENLLL S+   + +K+ADFG A  ++
Sbjct:    8 RFTDEYQLYEELGKGAFSVVRRCMKISTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHANIVRLHDSISEEGVHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVQ 164          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2A_RAT (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Rattus norvegicus GN=Camk2a PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.938e-34
Identity = 71/157 (45.22%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F + Y L  ELG GAFSVV+  + +  GQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y++ +LV GGELF+ IVA+ +Y+E +A   I+ +LE + + H+MG+VHRDLKPENLLL S+   + +K+ADFG A  ++
Sbjct:    8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 164          
BLAST of CX300749 vs. ExPASy Swiss-Prot
Match: KCC2A_PONAB (Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Pongo abelii GN=CAMK2A PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.938e-34
Identity = 71/157 (45.22%), Postives = 106/157 (67.52%), Query Frame = 1
Query:   91 KFAQNYMLARELGSGAFSVVKLAMHLETGQKAAVKIVSKKKLSDEDYQALMMEIQILSELDHPHIIKLFETYDEGTDFYIVTELVAGGELFDRIVAKAHYTEKEARDLIKIMLETMAYMHKMGIVHRDLKPENLLLCSETDDSDIKIADFGFAKRIK 561
            +F + Y L  ELG GAFSVV+  + +  GQ+ A KI++ KKLS  D+Q L  E +I   L HP+I++L ++  E    Y++ +LV GGELF+ IVA+ +Y+E +A   I+ +LE + + H+MG+VHRDLKPENLLL S+   + +K+ADFG A  ++
Sbjct:    8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 164          
The following BLAST results are available for this feature:
BLAST of CX300749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KCC2D_RAT1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_RABIT1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_PIG1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_MOUSE1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_HUMAN1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_CHICK1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_BOVIN1.723e-3447.13Calcium/calmodulin-dependent protein kinase type I... [more]
KC2D1_DANRE1.723e-3446.50Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_RAT2.938e-3445.22Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2A_PONAB2.938e-3445.22Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionC08001G11SK PhyRootSw1 Citrus sinensis cDNA clone C08001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300749 ID=CX300749; Name=CX300749; organism=Citrus sinensis; type=EST; length=586bp
CTCGTGCCGAATTCGGCACGAGGGTAACAGATAAATCAAAGGAAAATGGG
AAGTGCAGCATCAGCGAATAAAATGCATGTGGGCAACAAGAAGTTTGCTC
AGAATTATATGTTAGCTAGAGAACTCGGTAGTGGCGCCTTTTCTGTTGTC
AAACTCGCTATGCATCTAGAAACCGGTCAGAAGGCTGCGGTTAAGATAGT
ATCGAAGAAGAAACTGAGCGATGAAGATTATCAAGCCCTCATGATGGAAA
TCCAAATTTTGTCCGAATTAGATCATCCTCATATTATTAAACTGTTCGAA
ACATACGATGAAGGAACAGATTTTTATATAGTTACAGAATTAGTTGCAGG
TGGTGAATTATTTGATCGTATTGTAGCAAAAGCACATTATACAGAAAAGG
AAGCTAGAGATTTAATTAAGATTATGTTAGAAACTATGGCATATATGCAT
AAAATGGGTATTGTCCATCGTGATTTAAAACCAGAGAATTTATTATTATG
TTCAGAAACTGATGATTCTGATATTAAAATAGCTGATTTTGGTTTTGCTA
AGCGTATAAAAGATTTATCACCAAAAGAAACAGCAT
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