CX300746

Overview
NameCX300746
Unique NameCX300746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXN_DANRE (Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.504e-25
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 1
Query:    1 PPGRKIHTANMKWSEQLGAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAVAN 426
            P G +       ++E +   LL ++  Q TD        VG YFSAHWCPPCR  T  L   Y  + E   +FE+VF+S+DR    +T+YF+EMP+LA+P+ +      ++  +G+ GIP L+ +D+EG +IT  GR  + N
Sbjct:  141 PKGLEFPWGPKPFAEVVSGPLL-RNNRQTTDSTALEGSYVGVYFSAHWCPPCRSLTRVLVESYRKVKETGQKFEIVFVSADRSEESFTQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPTLILLDTEGHMITRQGRVEILN 281          

HSP 2 Score: 76.6406 bits (187), Expect = 8.811e-14
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   49 LGAKLLTKDGLQDTDYKLAGKKV--VGFYFSAHWCPPCRQFTPFLSAVYDDMVE--EHPE-FELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVD-SEGKVITMDGRAAVANSRGDVEKLW 453
            LG +L+  +  +  D +  G ++  +G YF      PC+QF   L+  Y    +  EH +  E+VFISSD+D  Q+ ++  EM + ALPF++R     +  K+ VT IP LVF+D + GKV+  +G   V +    +E  W
Sbjct:    9 LGERLVNGEKAE-VDVQALGSRLSLLGLYFGCSLNGPCKQFNASLTEFYSKFKKSSEHKDKLEIVFISSDQDQKQWQDFLQEMQWPALPFKDRHKKMKLWNKYKVTSIPSLVFIDAATGKVVCRNGLLVVRDDPKGLEFPW 148          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXN_MOUSE (Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.449e-24
Identity = 56/151 (37.09%), Postives = 80/151 (52.98%), Query Frame = 1
Query:    1 PPGRKIHTANMKWSEQLGAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAVANSRGDVEKLW 453
            P G +       + E +   LL  +G       L G  V G YFSAHWCPPCR  T  L   Y  + E   EFE++F+S+DR    + +YF+EMP+LA+P+ +      ++  +G+ GIP L+ +D +G+VIT  GR  V N     E  W
Sbjct:  158 PEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSHV-GVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPW 307          

HSP 2 Score: 73.559 bits (179), Expect = 7.459e-13
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 1
Query:   43 EQLGAKLLTKDGLQDTDYKLAGKKV--VGFYFSAHWCPPCRQFTPFLSAVYDDM-------------------VEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVD-SEGKVITMDGRAAVANSRGDVEKLW 453
            E LG KL+T  G +   + L  + +  +G YF      PC Q +  L+A Y  +                    E     E+VF+SSD+D  Q+ ++  +MP+LALP++E+     +  K+ V+ IP L+F+D + GKV+  +G   + +    +E  W
Sbjct:    7 ELLGDKLVTGGGEEVDVHSLGARGIALLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPW 165          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXN_HUMAN (Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 4.216e-24
Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 PPGRKIHTANMKWSEQLGAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAVANSRGDVEKLW 453
            P G +       + E +   LL  +G       L G  V G YFSAHWCPPCR  T  L   Y  + E    FE++F+S+DR    + +YF+EMP+LA+P+ +      ++  +G+ GIP L+ +D +G+VIT  GR  V N     E  W
Sbjct:  158 PEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSHV-GVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDEDCREFPW 307          

HSP 2 Score: 73.9442 bits (180), Expect = 5.711e-13
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 1
Query:   43 EQLGAKLLTKDGLQDTDYKLA--GKKVVGFYFSAHWCPPCRQFTPFLSAVYDDM-------------------VEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVD-SEGKVITMDGRAAVANSRGDVEKLW 453
            E LG KL+T  G +   + L   G  ++G YF      PC Q +  L+A Y  +                    E     E+VF+SSD+D  Q+ ++  +MP+LALP++E+     +  K+ ++ IP L+F+D + GKV+  +G   + +    +E  W
Sbjct:    7 ELLGEKLVTGGGEEVDVHSLGARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPW 165          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXN_BOVIN (Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.392e-24
Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 1
Query:    1 PPGRKIHTANMKWSEQLGAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAVAN 426
            P G +       + E +   LL  +G       L G  V G YFSAHWCPPCR  T  L   Y  + E   +FE++F+S+DR    + +YF+EMP+LA+P+ +      ++  +G+ GIP L+ +D +G+VIT  GR  V N
Sbjct:  158 PEGLEFPWGPKPFREVIAGPLLRSNGQSLESSSLEGSHV-GVYFSAHWCPPCRSLTRVLVESYRKIKEAGQKFEIIFVSADRSEDSFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLN 298          

HSP 2 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 47/159 (29.56%), Postives = 78/159 (49.06%), Query Frame = 1
Query:   43 EQLGAKLLTKDGLQDTDYKLA--GKKVVGFYFSAHWCPPCRQFTPFLSAVYDDM-------------------VEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVD-SEGKVITMDGRAAVANSRGDVEKLW 453
            E LG KL+T  G +   + LA  G  ++G YF      PC Q +  L+A Y  +                    E     E+VF+SSD+D  Q+ ++  +MP+LALP++E+     +  K+ ++ IP L+F+D + GKV+  +G   + +    +E  W
Sbjct:    7 ELLGEKLVTGGGEEVDVHSLAARGISLLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGPGAGASAEPEPRRRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATSGKVVCRNGLLVIRDDPEGLEFPW 165          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXN_XENLA (Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.499e-21
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 1
Query:    1 PPGRKIHTANMKWSEQLGAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAV 420
            P G +       + E +   L+  +        L G   VG YFSA+WCPPCR  T  L   Y  + E   +FE+V +S+DR    + +YF+EMP+LA+P+ +      ++  +G+ GIP L+ +D +G+VIT  GR  V
Sbjct:  137 PEGLEFPWGPKPFCEVIAGPLIRNNSQSQESSTLEGS-YVGIYFSAYWCPPCRSLTRVLVESYRKIKESGQKFEIVLVSADRSEESFKQYFSEMPWLAVPYSDEARRSRLNRLYGIQGIPNLIILDPKGEVITRQGRVEV 275          

HSP 2 Score: 68.1662 bits (165), Expect = 3.134e-11
Identity = 42/140 (30.00%), Postives = 70/140 (50.00%), Query Frame = 1
Query:   43 EQLGAKLLTKDGLQDTDYKLAGKKV--VGFYFSAHWCPPCRQFTPFLSAVYDDMVEEHPEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVD-SEGKVITMDGRAAVANSRGDVEKLW 453
            E LG KL+  +  ++ D +  G +V  +G  F      PC Q  P L   Y    +     E+VF+SSD D  ++  +  +MP+LALP++E+     +  KF ++ IP L+F++ S  K +  +G   V +    +E  W
Sbjct:    9 ELLGEKLVNSER-EEADVQALGSRVSLIGLLFGCGMSAPCLQLLPGLKDFY---CKTRDRLEIVFVSSDPDQKKWQLFVKDMPWLALPYQEKHRKLKLWNKFRISNIPSLIFIEASTVKTVCRNGLLLVKDDPEGLEFPW 144          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: TYPX_TRYBB (Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 1
Query:  112 KVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEEH---PEFELVFISSDRDPSQYTEYFNEMPFLALPFEERTANQAMSTKFGVTGIPMLVFVDSE-GKVITMDGRAAV 420
            K V  YFSA WCPPCR FTP L+  Y    E+H     FE+V IS D + S + +Y+ +MP+LALPF++R+    +   FGV  IP L+ ++++ G +I    R  V
Sbjct:   29 KTVFLYFSASWCPPCRGFTPVLAEFY----EKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRV 131          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXNL2_MOUSE (Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nxnl2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.272e-12
Identity = 43/128 (33.59%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   52 GAKLLTKDGLQDTDYKLAGKKVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEE---HPEFELVFISSDRDPSQYTEYFNEM--PFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAV 420
            G +L+T++G           KVV  YF+A  C P R FTP L   Y ++V E      FE+VF+S+D    +  ++  E+   +LALPF +   ++ +  ++ +T IP LV +   G VIT  GR  +
Sbjct:    7 GRRLVTREGTVVEAEVALQNKVVALYFAAGRCSPSRDFTPLLCDFYTELVSEARRPAPFEVVFVSADGSAEEMLDFMRELHGSWLALPFHDPYRHE-LKKRYEITAIPKLVVIKQNGAVITNKGRKQI 133          
BLAST of CX300746 vs. ExPASy Swiss-Prot
Match: NXNL2_HUMAN (Nucleoredoxin-like protein 2 OS=Homo sapiens GN=NXNL2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1
Query:  112 KVVGFYFSAHWCPPCRQFTPFLSAVYDDMVEE---HPEFELVFISSDRDPSQYTEYFNEM--PFLALPFEERTANQAMSTKFGVTGIPMLVFVDSEGKVITMDGRAAV 420
            KVV  YF+A  C P R FTP L   Y  +V E      FE+VF+S+D    +  ++  E+   +LALPF +   ++ +  ++ VT IP LV V   G+VIT  GR  +
Sbjct:   27 KVVALYFAAARCAPSRDFTPLLCDFYTALVAEARRPAPFEVVFVSADGSSQEMLDFMRELHGAWLALPFHDPYRHE-LRKRYNVTAIPKLVIVKQNGEVITNKGRKQI 133          
The following BLAST results are available for this feature:
BLAST of CX300746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NXN_DANRE6.504e-2538.03Nucleoredoxin OS=Danio rerio GN=nxn PE=2 SV=1[more]
NXN_MOUSE1.449e-2437.09Nucleoredoxin OS=Mus musculus GN=Nxn PE=1 SV=1[more]
NXN_HUMAN4.216e-2436.42Nucleoredoxin OS=Homo sapiens GN=NXN PE=1 SV=2[more]
NXN_BOVIN9.392e-2437.32Nucleoredoxin OS=Bos taurus GN=NXN PE=2 SV=1[more]
NXN_XENLA1.499e-2135.00Nucleoredoxin OS=Xenopus laevis GN=nxn PE=2 SV=1[more]
TYPX_TRYBB6.519e-1742.06Tryparedoxin OS=Trypanosoma brucei brucei PE=1 SV=... [more]
NXNL2_MOUSE1.272e-1233.59Nucleoredoxin-like protein 2 OS=Mus musculus GN=Nx... [more]
NXNL2_HUMAN1.407e-1137.96Nucleoredoxin-like protein 2 OS=Homo sapiens GN=NX... [more]
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Properties
Property NameValue
Genbank descriptionC08001G08SK PhyRootSw1 Citrus sinensis cDNA clone C08001G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300746 ID=CX300746; Name=CX300746; organism=Citrus sinensis; type=EST; length=556bp
CCCCCAGGAAGGAAAATTCACACAGCCAATATGAAGTGGTCGGAACAGCT
CGGCGCTAAGCTCCTGACGAAGGACGGCCTTCAGGACACGGACTACAAGC
TGGCTGGCAAGAAAGTGGTAGGCTTCTACTTCAGTGCGCACTGGTGCCCG
CCGTGCCGCCAGTTCACGCCCTTCCTCAGTGCCGTGTACGACGATATGGT
CGAGGAGCACCCGGAGTTCGAGCTCGTGTTTATCTCGTCGGACCGTGACC
CGTCGCAGTACACGGAGTACTTCAACGAGATGCCGTTCCTGGCACTTCCT
TTCGAGGAGCGTACGGCCAACCAGGCTATGAGCACCAAGTTTGGCGTCAC
GGGCATCCCCATGCTCGTGTTCGTGGACAGCGAGGGCAAGGTTATTACCA
TGGACGGCCGCGCCGCTGTTGCCAACTCGCGTGGCGACGTGGAGAAGCTG
TGGGAGCAGCTCACCAAGTAAAGAGCCTACTGTGTCGACGCCGCTTGGGT
TGGGTTTGACTTGACCAATTCGCGCAACAGTGTCTTCTTTTTCAGAGCTT
TGCAAA
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