CX300744

Overview
NameCX300744
Unique NameCX300744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7093 contig Csv1_Contig7093:506..1115. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.307e-55
Identity = 106/205 (51.71%), Postives = 142/205 (69.27%), Query Frame = 1
Query:    1 TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGG-VFRIGSISDNPTGGGIYQ---DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKNA 603
            TAS  RPNPQGSYHYG IN T+TI+L ++ G+V+GK R+A+N VS    +TPLKLA+YF I   VF+  +I+D+PT   I     +  V+   +R F+E+VF+N E  +QS+HL+GY F+ V ++ G WT   R  YNL DAV+R TVQVYPK W+AI +  DN GMWN+RSE+  R+YLGQQ Y  V +   SLRDEY +P+ +
Sbjct:  332 TASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETS 536          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.422e-52
Identity = 99/203 (48.77%), Postives = 130/203 (64.04%), Query Frame = 1
Query:    1 TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYF-KIGGVFRIGSISDNPTG--GGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN 600
            TAS  RPNPQGSYHYG IN T+TI++ +S  QV GK RY +N +S    +TPLKL +YF      F+   ++D        +   T V  A YR F+EI+F+N E  I++YHL+GY F+ V ++ G+W+   R  YNL D ++R  +QVYP SW+AI +  DN GMWNLRSE W + YLG+Q Y  V + S SLRDEY IP N
Sbjct:  334 TASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDN 536          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.292e-45
Identity = 87/201 (43.28%), Postives = 129/201 (64.18%), Query Frame = 1
Query:    1 TASGPRPNPQGSYHYGLINTTKTIRLSSSAGQV-NGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN 600
            +ASG RPNPQGS+HYG IN T T  L S    + NG  R  +N +SF+   TP++LAD  K+ G +++    D P    +  D +++ A Y+ FI++VFQN++  IQS+H++GY F+VVGMD G W+   +  YN  DA++R T++VYP  W+A+ I+LDNVG+WN+R E+  R YLG++ Y+R+       + E   P N
Sbjct:  347 SASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDN 546          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.179e-44
Identity = 90/201 (44.78%), Postives = 127/201 (63.18%), Query Frame = 1
Query:    1 TASGPRPNPQGSYHYGLINTTKTIRLSSSAG-QVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN 600
            +ASG RPNPQGS+ YG IN T    L +     ++GK+R  +N +SF    TP++LAD  K+  V+++      P  G     T+++   YR F+E+V QN++  +QSYH++GY F+VVGMD G+WT  SR  YN  D +AR T+QVYP +WSAI I+LDN G WNLR+E+    YLGQ+ Y+RV     + + E+  P N
Sbjct:  344 SASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDN 543          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.179e-44
Identity = 89/202 (44.06%), Postives = 133/202 (65.84%), Query Frame = 1
Query:    1 TASGPRPNPQGSYHYGLINTTKTIRLSS-SAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQ-DTAVMGADYRAFIEIVFQNDEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMWNLRSESWARQYLGQQFYLRVYTASTSLRDEYPIPKN 600
            +ASG RPNPQGS+HYG IN T+T  L S    ++NGK R  +N +SF+   TP++LAD  K+ G + +    D P    + +  ++++ A Y+ FI+++FQN++  IQS+H++GY F+VV MD G W+    + YN  DAVAR TV+VYP +W+A+ I+LDNVG+WN+R E+  R YLGQ+ Y+R+     +   E   P+N
Sbjct:  346 SASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPEN 546          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 46/181 (25.41%), Postives = 80/181 (44.20%), Query Frame = 1
Query:   13 PRPNPQGSYHYGLINTTKTIRLSSSAGQVNGKQRYAINSVSFI---------------PADTPLKLADYFKIGGVFRIGSISDNPTGGGIYQDTAVMGADYRAFIEIVFQN------DEDIIQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 492
            P+P PQ      L+NT           +++G  ++AIN+VS +                 DT     ++ K   V +    S++  G G+Y         +   I+I+ QN      D   I  +HL+G+ FWV+G   G+++     ++NL++   R T  ++P  W+A+    DN G+W
Sbjct:  365 PKPPPQNHRRIILLNTQN---------KIDGYTKWAINNVSLVLPTQLYLGSIRYGINAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYM------LKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVW 530          
BLAST of CX300744 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 46/169 (27.22%), Postives = 75/169 (44.38%), Query Frame = 1
Query:   52 INTTKTIRLSSSAGQVNGKQRYAINSVSFIPADTPLKLADYFKIGGVFRIG----------SISDNPT------GGGIYQDTAVMGADYRAFIEIVFQNDEDI------IQSYHLNGYQFWVVGMDGGQWTSASRNQYNLRDAVARVTVQVYPKSWSAIYIALDNVGMW 492
            + + + I L ++   +NG  ++AIN VS     TP   A  F +   F              I   PT      G G+YQ            ++++ QN   +      I  +HL+G+ FWV+G   G++T+   +  NL++   R TV ++P  W+AI    DN G+W
Sbjct:  371 VKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQ------FKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVW 533          
The following BLAST results are available for this feature:
BLAST of CX300744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ASOL_BRANA3.307e-5551.71L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC3.422e-5248.77L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKS1_ARATH5.292e-4543.28Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH1.179e-4444.78Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH1.179e-4444.06Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
ASO_TOBAC8.528e-1125.41L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCMA8.528e-1127.22L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
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Properties
Property NameValue
Genbank descriptionC08001G06SK PhyRootSw1 Citrus sinensis cDNA clone C08001G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300744 ID=CX300744; Name=CX300744; organism=Citrus sinensis; type=EST; length=610bp
ACAGCAAGTGGACCAAGGCCTAACCCACAGGGTTCATACCACTATGGTCT
CATAAACACTACCAAAACTATCAGGCTTTCAAGTTCTGCTGGGCAAGTTA
ATGGCAAGCAGAGATATGCAATCAACAGCGTGTCCTTTATTCCAGCTGAC
ACTCCCCTAAAGCTTGCTGACTACTTCAAGATTGGAGGAGTTTTCCGCAT
CGGAAGCATTTCTGATAATCCTACCGGTGGAGGGATTTACCAAGACACAG
CAGTTATGGGGGCTGACTACAGAGCTTTTATTGAAATTGTGTTCCAAAAT
GATGAAGACATTATCCAGAGCTATCACCTTAATGGCTACCAATTTTGGGT
TGTCGGTATGGATGGAGGCCAATGGACATCTGCTAGTAGAAACCAGTACA
ATCTCCGCGATGCAGTTGCCCGTGTAACCGTTCAGGTGTATCCCAAGTCA
TGGTCTGCGATTTATATAGCACTGGATAACGTAGGTATGTGGAACTTGAG
GTCTGAGTCTTGGGCACGACAGTACCTTGGACAACAATTTTACTTGCGTG
TTTACACAGCATCAACTTCACTCAGGGATGAATATCCCATCCCAAAGAAT
GCACGTCTTT
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