CX300737

Overview
NameCX300737
Unique NameCX300737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300737 vs. ExPASy Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.120e-11
Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 3 
Query:    3 VLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLAQILT 197
            +LL+RV L+WFPN+ W  QP  ++  + DPYL +FR I+PP+   +D+SP+L F +L  + QI++
Sbjct:   22 LLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILGFILLQCIMQIVS 85
The following BLAST results are available for this feature:
BLAST of CX300737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF19_GUITH2.120e-1144.62Uncharacterized protein ycf19 OS=Guillardia theta ... [more]
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Properties
Property NameValue
Genbank descriptionC08001F11SK PhyRootSw1 Citrus sinensis cDNA clone C08001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300737 ID=CX300737; Name=CX300737; organism=Citrus sinensis; type=EST; length=529bp
GGGTTTTGTTGGTTAGGGTTTTGCTGAGTTGGTTCCCCAACATTCCTTGG
GAAAGGCAGCCGCTTTCGGCCATTCGGGACTTGTGTGATCCTTATTTGAA
TCTCTTTCGGAATATTATCCCCCCTGTTTTCGATACACTGGATGTCAGCC
CCTTGTTAGCTTTCGCCGTTTTGGGAACACTCGCCCAGATACTTACTTTC
AGTCGGGGAGCGTGATCTTGCTGTTTTGCTAAAGATACTAATGGCACCAC
CTAGTGGAGTCTCAACTTCAGAAAGGCGGAGTTGTTAAGATTTTCAGAAG
CTGGAAACAATAGCTTAGCTTTGATGAAGATCAGATGATACCTCTTGTGA
TGCCTTGCAGAAGTTTTAAGAAGTTGAAATGTTGTTACAGCAAAAATAGT
TCTTTTGATTGTAAAATTATATACCGAGGAATTTTCAAGCCACAAATAAC
ACCAAAATCTTGTTGCCATTTGCTAAACTAGGAGCATTATTCCTTGATTT
GTTTCTTAAAAAAAAAGGGGGGGCCCGGT
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