CX300732

Overview
NameCX300732
Unique NameCX300732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300732 vs. ExPASy Swiss-Prot
Match: ALG5_DICDI (Dolichyl-phosphate beta-glucosyltransferase OS=Dictyostelium discoideum GN=alg5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.519e-27
Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 1
Query:   34 LRSFVSKVFHILVSVFIGTSVIDTQCGFKLFSRKAALLLFSNQHIQRWAFDIELLYLAHVFKIPVAEEAVKWEEIPGSKLNVMAASIQMIRDIVLIRLCYAIGLWKMK 357
            LR+ +   FHI V       + DTQCGFKLF+R+ A  +F   HI+RWAFD+E+LYLA    IP+AE AV W EI GSKL+  ++SIQM +DIV IR  Y +G+WK+K
Sbjct:  219 LRNILMYGFHIFVQTLCVKGIKDTQCGFKLFTRETARRIFPTLHIERWAFDVEILYLAQKLNIPIAEVAVNWTEIDGSKLDPFSSSIQMAKDIVRIRFRYLLGIWKIK 326          
BLAST of CX300732 vs. ExPASy Swiss-Prot
Match: ALG5_HUMAN (Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 7.338e-25
Identity = 57/119 (47.90%), Postives = 76/119 (63.87%), Query Frame = 1
Query:    1 LVPNSARGRHPLRSFVSKVFHILVSVFIGTSVIDTQCGFKLFSRKAALLLFSNQHIQRWAFDIELLYLAHVFKIPVAEEAVKWEEIPGSKLNVMAASIQMIRDIVLIRLCYAIGLWKMK 357
            L   S   R   R+ +   FH LV       + DTQCGFKLF+R+AA   FS+ H++RWAFD+ELLY+A  FKIP+AE AV W EI GSKL    + +QM +D++ IRL Y  G W+++
Sbjct:  200 LEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHVERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLE 318          
BLAST of CX300732 vs. ExPASy Swiss-Prot
Match: ALG5_MOUSE (Dolichyl-phosphate beta-glucosyltransferase OS=Mus musculus GN=Alg5 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.635e-24
Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    1 LVPNSARGRHPLRSFVSKVFHILVSVFIGTSVIDTQCGFKLFSRKAALLLFSNQHIQRWAFDIELLYLAHVFKIPVAEEAVKWEEIPGSKLNVMAASIQMIRDIVLIRLCYAIGLWKMK 357
            L   S   R   R+F+   FH LV       + DTQCGFKL +R+AA   FS+ HI+RWAFD+ELLY+A   +IP+AE AV W EI GSKL    + +QM +D++ IRL Y  G W++K
Sbjct:  200 LEKESIAQRSYFRTFLMYGFHFLVWFLCVKGIRDTQCGFKLLTREAAARTFSSLHIERWAFDVELLYIAQCLQIPIAEVAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLK 318          
BLAST of CX300732 vs. ExPASy Swiss-Prot
Match: ALG5_SCHPO (Dolichyl-phosphate beta-glucosyltransferase OS=Schizosaccharomyces pombe GN=alg5 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.769e-21
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 1
Query:   34 LRSFVSKVFHILVSVFIGTSVIDTQCGFKLFSRKAALLLFSNQHIQRWAFDIELLYLAHVFKIPVAEEAVKWEEIPGSKLNVMAASIQMIRDIVLIRLCYAIGLWK 351
            +R+F+   FH L+ +     + DTQCGFKLFSR+A   +F   H++ W FDIE+L LA  F +P+ E  + W E+ GSK+ ++  SI M  D+++IRL Y  G+W+
Sbjct:  209 IRNFLMHCFHKLLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEVLTLARFFGLPIIEVPITWHEVGGSKMTLLKDSISMAIDLLVIRLNYTFGIWE 314          
BLAST of CX300732 vs. ExPASy Swiss-Prot
Match: ALG5_YEAST (Dolichyl-phosphate beta-glucosyltransferase OS=Saccharomyces cerevisiae GN=ALG5 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19
Identity = 45/109 (41.28%), Postives = 70/109 (64.22%), Query Frame = 1
Query:   25 RHPLRSFVSKVFHILVSVFIGTSVIDTQCGFKLFSRKAALLLFSNQHIQRWAFDIELLYLAHVFKIPVAEEAVKWEEIPGSKLNVMAASIQMIRDIVLIRLCYAIGLWK 351
            R  +R+ +   FH LV +F   S+ DTQCGFKLF+R A L +F   H + W FD+E+L LA   +I + E  + W E+ GSK+ +   SI+M +D+V+IR+ Y +G+++
Sbjct:  221 RSMIRNCLMYGFHTLVFIFGIRSIKDTQCGFKLFNRAAILKIFPYLHTEGWIFDVEILILAIRKRIQIEEIPISWHEVDGSKMALAIDSIKMAKDLVIIRMAYLLGIYR 329          
The following BLAST results are available for this feature:
BLAST of CX300732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ALG5_DICDI3.519e-2752.78Dolichyl-phosphate beta-glucosyltransferase OS=Dic... [more]
ALG5_HUMAN7.338e-2547.90Dolichyl-phosphate beta-glucosyltransferase OS=Hom... [more]
ALG5_MOUSE1.635e-2447.90Dolichyl-phosphate beta-glucosyltransferase OS=Mus... [more]
ALG5_SCHPO3.769e-2142.45Dolichyl-phosphate beta-glucosyltransferase OS=Sch... [more]
ALG5_YEAST2.701e-1941.28Dolichyl-phosphate beta-glucosyltransferase OS=Sac... [more]
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Properties
Property NameValue
Genbank descriptionC08001F06SK PhyRootSw1 Citrus sinensis cDNA clone C08001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300732 ID=CX300732; Name=CX300732; organism=Citrus sinensis; type=EST; length=469bp
CTCGTGCCGAATTCGGCACGAGGTAGACATCCACTTCGTTCATTTGTGAG
CAAAGTGTTCCACATCTTGGTATCTGTGTTTATTGGTACATCAGTGATTG
ATACACAGTGTGGATTTAAACTATTCTCTCGCAAAGCGGCATTGTTGTTG
TTTTCCAATCAACACATCCAAAGATGGGCATTCGATATTGAATTGCTCTA
TCTAGCTCATGTGTTCAAGATCCCTGTTGCAGAGGAAGCAGTGAAATGGG
AGGAGATCCCTGGATCAAAATTGAATGTGATGGCAGCATCTATACAAATG
ATAAGAGATATTGTTCTGATTAGATTGTGTTATGCAATTGGATTGTGGAA
GATGAAAGTTCGATGATGATCAAGATAGTGATCCAGTTTTTGCAATTTGA
TTTTTAAATATATATGCATCTATATTCTAACCAATCCAATGATCAACGAT
GGAAAAAAAAAAAAAAAAA
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