CX300730

Overview
NameCX300730
Unique NameCX300730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length481
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1401 contig Csv1_Contig1401:289..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_DICDI (N-acetyltransferase 5 homolog OS=Dictyostelium discoideum GN=nat5 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.181e-27
Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA +LM++LE+ S+KI   YFVDLFVR SNT AI MY K GY +YR V+ YYSG+ED LDMRKAL RDVEKKSIIPLK PV P + +
Sbjct:   80 EFRRIGLADRLMHILEEGSEKIYDGYFVDLFVRKSNTLAINMYTKFGYSVYRTVIGYYSGDEDALDMRKALPRDVEKKSIIPLKHPVYPTDAD 172          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_MOUSE (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Mus musculus GN=Nat5 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.120e-23
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM LLE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSIIPL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMELLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_MACFA (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Macaca fascicularis GN=NAT5 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.120e-23
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM LLE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSIIPL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMELLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_HUMAN (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Homo sapiens GN=NAT5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.120e-23
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM LLE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSIIPL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMELLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_XENTR (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Xenopus tropicalis GN=nat5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM LLE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSI+PL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMELLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIVPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_XENLA (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Xenopus laevis GN=nat5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM LLE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSI+PL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMELLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIVPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT5_DANRE (N-terminal acetyltransferase B complex catalytic subunit NAT5 OS=Danio rerio GN=nat5 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.910e-23
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 EYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG-----EEDGLDMRKALSRDVEKKSIIPLKRPVTPDELE 280
            E+RR  LA KLM +LE+IS++    +FVDLFVR SN  A+ MY++LGY +YR V+ YYS      +ED  DMRKALSRD EKKSIIPL  PV P+++E
Sbjct:   82 EFRRLGLAAKLMEMLEEISER-KGGFFVDLFVRVSNQVAVNMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE 178          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: ARD1_LEIDO (N-terminal acetyltransferase complex ARD1 subunit homolog OS=Leishmania donovani GN=ARD1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.752e-20
Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 2
Query:    5 YRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG---------EEDGLDMRKALSRDVE--KKSIIPLKRPVTPDELEY 283
            +RR  L + LM  L  +S+ +  AYFVDLFVR SN  A  MY +LGY++YR VL YY G         +ED LDMR AL RD E  K S+IPL RP+ P+ELE+
Sbjct:   82 FRRVALGETLMAELAQMSELVHNAYFVDLFVRKSNQVAQDMYHRLGYIVYRTVLNYYHGDGPKGPFKSDEDALDMRLALRRDKERRKSSVIPLDRPIKPEELEW 185          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: YCGC_SCHPO (Uncharacterized N-acetyltransferase C16C4.12 OS=Schizosaccharomyces pombe GN=SPCC16C4.12 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.501e-15
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 2
Query:    8 RRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSG----EEDGLDMRKALSRDVEKKSI 241
            RR  LA+ +M+ LE + +  + A+FVDLFVRASN  AI  Y+ LGY +YRRV+ YYS     +ED  DMRK LSRDV ++SI
Sbjct:   84 RRLGLARTMMDYLETVGNS-ENAFFVDLFVRASNALAIDFYKGLGYSVYRRVIGYYSNPHGKDEDSFDMRKPLSRDVNRESI 164          
BLAST of CX300730 vs. ExPASy Swiss-Prot
Match: NAT3_YEAST (N-terminal acetyltransferase B complex catalytic subunit NAT3 OS=Saccharomyces cerevisiae GN=NAT3 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.792e-13
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 2
Query:    5 YRRQQLAKKLMNLLEDISDKID-KAYFVDLFVRASNTPAIKMYEKLGYVIYRRVLRYYSGEEDG--------------LDMRKALSRDVEKKSIIPLKRPVTPDELEYD*LCFP 301
            +RR  LA KL N LE ++D +  +  F+DLFV+ +N  AIK+YEKLGY +YRRV+ YY+  EDG               DMRKA++RD          R V PD   +   C+P
Sbjct:   87 FRRISLASKLCNTLETMTDVMPHEVNFIDLFVKCNNQLAIKLYEKLGYSVYRRVVGYYNSAEDGYPDTLKKVDDNKDAFDMRKAMARD--------RNRSVRPDGRSHK--CYP 190          
The following BLAST results are available for this feature:
BLAST of CX300730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NAT5_DICDI2.181e-2765.59N-acetyltransferase 5 homolog OS=Dictyostelium dis... [more]
NAT5_MOUSE1.120e-2358.16N-terminal acetyltransferase B complex catalytic s... [more]
NAT5_MACFA1.120e-2358.16N-terminal acetyltransferase B complex catalytic s... [more]
NAT5_HUMAN1.120e-2358.16N-terminal acetyltransferase B complex catalytic s... [more]
NAT5_XENTR1.463e-2357.14N-terminal acetyltransferase B complex catalytic s... [more]
NAT5_XENLA1.463e-2357.14N-terminal acetyltransferase B complex catalytic s... [more]
NAT5_DANRE1.910e-2357.14N-terminal acetyltransferase B complex catalytic s... [more]
ARD1_LEIDO5.752e-2050.96N-terminal acetyltransferase complex ARD1 subunit ... [more]
YCGC_SCHPO2.501e-1553.66Uncharacterized N-acetyltransferase C16C4.12 OS=Sc... [more]
NAT3_YEAST1.792e-1341.23N-terminal acetyltransferase B complex catalytic s... [more]
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Properties
Property NameValue
Genbank descriptionC08001F04SK PhyRootSw1 Citrus sinensis cDNA clone C08001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300730 ID=CX300730; Name=CX300730; organism=Citrus sinensis; type=EST; length=481bp
AGAATACCGCAGGCAGCAACTGGCCAAGAAACTTATGAACCTGCTAGAAG
ACATCAGTGACAAGATTGATAAGGCTTACTTTGTGGATCTTTTTGTGAGA
GCTTCAAACACACCGGCCATAAAAATGTATGAAAAGCTCGGATATGTAAT
CTATAGACGGGTTCTACGCTATTATTCTGGGGAAGAAGATGGGTTAGATA
TGAGGAAAGCATTATCTCGAGATGTTGAAAAGAAATCCATCATTCCCCTC
AAACGGCCAGTCACACCCGATGAGTTAGAGTATGATTAGCTTTGTTTTCC
ATGTTTTTTTCTGCCAAGTCAACTTGATGAACACTTGCAACTTGCATGTA
ATTTTGGAAATGCAGAGGTTTTAGGCATATTATGTAAGTGTGATATTTGG
GATCGTATTTCCTACAAATACCTTGTCAGCTTCAGAAGGTTGACTTATTT
TTACTTCTGTTTCCAAAAAAAAAAAAAAAAA
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