EY702450

Overview
NameEY702450
Unique NameEY702450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9983 contig Csv1_Contig9983:1..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 7.314e-52
Identity = 94/164 (57.32%), Postives = 119/164 (72.56%), Query Frame = 3
Query:   57 PLFETKEAKGRVS---HKVVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRH-EEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            PLF T E  GR++   ++V AAT F G+ LI +YR  + P     G RRWAW+G+  AE +F  +W++T SVRW   +   FKDRL+  + E++LP VDIFVCTADP +EPP LVISTVLSVM+Y+Y PEKL++YLSDDAGS  TFY L EAS F+K+WIPFCK
Sbjct:   18 PLFAT-EKPGRMAMAAYRVSAATVFAGVLLIWLYRATHLPPGGGDGVRRWAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCK 180          

HSP 2 Score: 36.965 bits (84), Expect = 7.314e-52
Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  619 EWLXIQKTYPDMEKRI*SGLAKGSISEEPRIHTRGF 726
            EW  +++ Y DM  R+ S +  G I E PR H+RGF
Sbjct:  207 EWFTMKELYKDMTDRVNSVVNSGRIPEVPRCHSRGF 242          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.229e-50
Identity = 121/283 (42.76%), Postives = 166/283 (58.66%), Query Frame = 3
Query:   60 LFETKEAKGRVSHKVVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKNSMLNQGHQKPGLLKTW*ER*RYHLCS-RVAXYPENIPRHGKTYL-IRPCKGQHFRRTKDPHKGISGWNGKEPRPDHQPLYR**ATGETPMQEIKKGGHLATWVSWDQEKGWRPPY---FKAGA 893
            LF T++  GR  +++ AAT   GI L+L YR    P   +G   R AW+G+  AE +F+++W+ITQSVRW       FK+RL+ R++E LPGVD+FVCTADP +EPP+LVIST+LSVM+YNYP EK+SVYLSDD GS  TFYAL EAS F+K W+PFC+    N   + P    +  E   ++LCS +   + +N+    +  +      G+     K  HKG   WN +    +HQP+ +    G++       G  L T V   +EK   P Y   FKAGA
Sbjct:   11 LFATEKVGGRAVYRLQAATVAAGILLVLYYRATRVPAAGEG---RAAWLGMAAAELWFAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRR--YNIEPRSPAAYFSESEG-HHNLCSPKEWSFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAVDDDGNVLPTLVYMAREKS--PQYHHNFKAGA 285          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.911e-50
Identity = 125/287 (43.55%), Postives = 162/287 (56.45%), Query Frame = 3
Query:   57 PLFETKEAKGRVSHKVVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKNSMLNQGHQKPGLLKTW*ER*RYHLC-----SRVAXYPENIPRHGKTYLIRPCKGQHFRRTKDPHKGISGWNGKEPRPDHQPLYR**ATGETPMQEIKKGGHLATWVSWDQEKGWRPPY---FKAGA 893
            PLF T+E  GR  ++V AAT   GI L+L YR    P   +G   R AW+G+  AE +F+++W+I QSVRW       F+DRL+ R+E+ LPGVDIFVCTADP SEPP+LVIST+LSVM+YNYP EK+SVYLSDD GS  TFYAL EAS F+K W+PFCK    N   + P    +   +  ++LC     + +    E +     T  +    G+     K  HKG   WN      +HQP+ +    G+           L T V   +EK  RP Y   FKAGA
Sbjct:   15 PLFTTEELGGRAVYRVQAATVAAGILLVLYYRATRVPAAGEG---RAAWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAERYEQNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKR--YNIEPRSPAAYFSE-SKVHHNLCIPKEWALIKNLYEEMRERIDTATM---SGKIPEEMKLKHKGFDEWNSDFTLKNHQPIVQILIDGKNRNAIDDDRNVLPTMVYVAREK--RPQYHHNFKAGA 290          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.547e-43
Identity = 88/165 (53.33%), Postives = 114/165 (69.09%), Query Frame = 3
Query:   57 PLFETKEAKGRV-SHKVVAATCFVGICLILIYRLVNFPKEEQGGRR----RWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            PLFET+   GRV +++  +A+ FV ICLI  YR+      E G  R    R  W  +F+ E +F L+W++TQS RW+     PF DRLS R+   LP +D+FVCTADP+ EPP LV++TVLSV + +YPPEKL+VYLSDD GSE TFYAL EA+ F+K W+PFCK
Sbjct:   18 PLFETRRRTGRVIAYRFFSASVFVCICLIWFYRI-----GEIGDNRTVLDRLIWFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRRYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCK 177          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 61/155 (39.35%), Postives = 96/155 (61.94%), Query Frame = 3
Query:   87 RVSHK-----VVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            R+SHK      V  T    +  +L+YR+++  +++        WI  F+ E  F+  W++  +++WS   +  + +RL  R  E LP VD+FV TADP+ EPP +V++TVLS+++ NYP  KL+ Y+SDD  S  T+++L EAS F+K W+PFCK
Sbjct:   14 RISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDT------VWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVHE-LPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCK 161          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 3
Query:   99 KVVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            +VV  T    +  +L+YR++   +          W+  F+ E FFS  W++  S++WS   +  + +RL  R  + LP VD+FV TADP+ EPP LV +T+LS+++ NYP  KL+ Y+SDD  S  T+++L EAS F+K W+PFCK
Sbjct:   23 RVVDLTILGFLFSLLLYRILLMNQNNS------VWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVHD-LPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCK 161          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 3
Query:   87 RVSHK-----VVAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            R+SHK     +V  T  V +  +L YR+++  +          W+  F+ E  FS  W+I   ++WS     P+ +RL  R  + LP VD+FV TADP+ EPP +V++TVLS+++ NYP  KL+ Y+SDD  S  T+++L EAS F K W PFCK
Sbjct:   14 RISHKSYILRIVDLTILVLLFSLLWYRILHMCENNT------IWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVHD-LPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCK 161          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.931e-26
Identity = 75/230 (32.61%), Postives = 122/230 (53.04%), Query Frame = 3
Query:  210 IFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKNSMLNQGHQKPGLLKTW*ER*RYHLCSRVAXYPENIPRHGKTYLIRPCKGQHFRRTKDPHKGISG-WNGKEPRPDHQPLYR**ATGETPMQEIKKG-GHLATWVSWDQEKGWRPPYFKAGA 893
            + +++   +  W  T S+R +  H     ++ + + E+  P +D+F+CTADP  EPP +V++T LSVM+Y YP +K+SVY+SDD GS  TF+AL+EA+ FSK W+PFCK +  N   + P +  +     R      +    E++ +    +++   K +    T D  +G+   W  K  R DH  + +     ET M   +K       +VS ++ K   P +FKAGA
Sbjct:   60 LLLSDIVLAFMWATTTSLRLNPVHRTECPEKYAAKPED-FPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKN--NVQDRSPEVYFSSESHSRSDEAENLKMMYEDM-KSRVEHVVESGKVETAFITCDQFRGVFDLWTDKFSRHDHPTIIQVLQNSETDMDNTRKYIMPNLIYVSREKSK-VSPHHFKAGA 284          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.530e-26
Identity = 49/111 (44.14%), Postives = 77/111 (69.37%), Query Frame = 3
Query:  210 IFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKNS 542
            + +++   +  W  T S+R +  H   + ++ + + E+  P +D+F+CTADP  EPP +V++T LSVM+Y YP  K+SVY+SDD GS  T +AL+EA+ FSK+W+PFCKN+
Sbjct:   57 LLLSDIVLAFMWATTTSLRLNPIHRTEYPEKYAAKPED-FPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNN 166          
BLAST of EY702450 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.114e-25
Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 3
Query:  201 WIGIFMAEFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCK 536
            W+  F+ E  FS  W+++   +WS     P+ DRL  R  + LP VD+FV TADP+ EPP +V++TVLS+++ NYP  KL+ Y+SDD  S  T+++L EAS F+K W+PFCK
Sbjct:   51 WLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYD-LPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCK 161          
The following BLAST results are available for this feature:
BLAST of EY702450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CSLE2_ORYSJ7.314e-5257.32Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLE6_ORYSJ2.229e-5042.76Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLE1_ORYSJ2.911e-5043.55Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLE1_ARATH1.547e-4353.33Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLB4_ARATH5.906e-2739.35Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH5.906e-2740.41Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLB6_ARATH1.316e-2640.65Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLG1_ARATH2.931e-2632.61Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLG2_ARATH6.530e-2644.14Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLB2_ARATH1.114e-2547.32Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702450 ID=EY702450; Name=EY702450; organism=Citrus sinensis; type=EST; length=928bp
TGCGGTACCGGTCCGGATTCCCGTTCCGACCACGCGTCCGGAAGAAGCTA
TGTGTACCACTTTTCGAGACTAAGGAGGCGAAGGGTAGGGTTTCTCACAA
GGTGGTTGCAGCAACATGTTTTGTGGGAATTTGTTTGATATTGATTTACA
GATTGGTTAACTTTCCAAAAGAAGAACAAGGAGGAAGAAGGAGATGGGCT
TGGATTGGCATTTTCATGGCTGAATTTTTTTTCAGTTTGTTCTGGATCAT
CACCCAGTCCGTTCGTTGGAGTGTAAGACACCATTTGCCTTTCAAAGACA
GACTCTCTCTAAGACATGAGGAGAAGTTACCGGGAGTTGACATTTTCGTG
TGCACGGCGGACCCAATCTCAGAGCCACCAACGTTGGTGATTAGTACTGT
CTTATCCGTCATGTCATATAACTATCCACCGGAAAAATTGAGTGTTTATT
TGTCTGATGATGCTGGTTCAGAATTCACATTTTATGCTCTGTTAGAGGCC
TCTCATTTCTCAAAGTATTGGATACCGTTCTGCAAAAATTCGATGTTGAA
CCAAGGTCACCAGAAGCCTGGTTTGCTAAAAACTTGGTGAGAAAGATAAA
GGTACCACTTATGCTCCAGAGTGGCTANCTATCCAGAAAACATACCCAGA
CATGGAAAAACGTATTTGATCCGGCCTTGCAAAGGGCAGCATTTCCGAAG
AACCAAGGATCCACACAAGGGGATTTCTGGATGGAATGGAAAAGAACCGA
GGCCGGATCACCAGCCATTGTACAGATAATAAGCGACGGGAGAAACACCA
ATGCAGGAAATTAAAAAAGGGGGGCATTTGGCCACATGGGTTTCCTGGGA
CCAGGAAAAGGGTTGGAGGCCCCCCTACTTCAAAGCTGGGGCCTGATGGC
CCGAAAAAAGGGCCCCCGGGTAACCAGG
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