CX300722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_URECA (40S ribosomal protein S2 OS=Urechis caupo GN=RPS2 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.524e-60 Identity = 108/158 (68.35%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+GKCGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A Y A++ TYS+LTPDLW T F +P QEY+D LAK Sbjct: 104 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKSPYQEYTDYLAK 261
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_DROME (40S ribosomal protein S2 OS=Drosophila melanogaster GN=sop PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.283e-59 Identity = 108/158 (68.35%), Postives = 128/158 (81.01%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGHIGLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+GKCGSV VRLIPAPRG+GIV++ VPKKLL MAGIED Y+S G + T GN A A Y A++KTY++LTPDLW TP Q YSD L+K Sbjct: 101 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLSK 258
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS23_ARATH (40S ribosomal protein S2-3 OS=Arabidopsis thaliana GN=RPS2C PE=1 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 1.676e-59 Identity = 104/160 (65.00%), Postives = 129/160 (80.62%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAKKA 483 AGQRTRFK ++ VGDGNGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+GKCGSV VR++PAPRGSGIVA+ VPKK+L AGI+DV++S+ G ++T GN A + L KTY FLTP+ W T F +P QE++D LA KA Sbjct: 112 AGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKA 271
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_ICTPU (40S ribosomal protein S2 OS=Ictalurus punctatus GN=rps2 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.734e-59 Identity = 106/158 (67.09%), Postives = 131/158 (82.91%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK++++PVRRGYWG G+PHTVPCKV+G+CGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A + A+SKTYS+LTPDLW T F +P QE++D LAK Sbjct: 103 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLAK 260
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS22_ARATH (40S ribosomal protein S2-2 OS=Arabidopsis thaliana GN=RPS2B PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.877e-59 Identity = 103/160 (64.38%), Postives = 129/160 (80.62%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAKKA 483 AGQRTRFK ++ VGDGNGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+GKCGSV VR++PAPRGSGIVA+ VPKK+L AGI+DV++S+ G ++T GN A + L KTY FLTP+ W T F +P QE++D L+ KA Sbjct: 111 AGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKA 270
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS21_ARATH (40S ribosomal protein S2-1 OS=Arabidopsis thaliana GN=RPS2A PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 4.877e-59 Identity = 103/160 (64.38%), Postives = 129/160 (80.62%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAKKA 483 AGQRTRFK ++ VGDGNGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+GKCGSV VR++PAPRGSGIVA+ VPKK+L AGI+DV++S+ G ++T GN A + L KTY FLTP+ W T F +P QE++D L+ KA Sbjct: 111 AGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKA 270
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_RAT (40S ribosomal protein S2 OS=Rattus norvegicus GN=Rps2 PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 8.319e-59 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+G+CGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A + A+SKTYS+LTPDLW T F +P QE++D L K Sbjct: 118 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_MOUSE (40S ribosomal protein S2 OS=Mus musculus GN=Rps2 PE=1 SV=3) HSP 1 Score: 226.483 bits (576), Expect = 8.319e-59 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+G+CGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A + A+SKTYS+LTPDLW T F +P QE++D L K Sbjct: 118 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_HUMAN (40S ribosomal protein S2 OS=Homo sapiens GN=RPS2 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 8.319e-59 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+G+CGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A + A+SKTYS+LTPDLW T F +P QE++D L K Sbjct: 118 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275
BLAST of CX300722 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 8.319e-59 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 4 AGQRTRFKCYIAVGDGNGHIGLGVKCAREVATAIRGGIINAKMNLVPVRRGYWGLNAGQPHTVPCKVSGKCGSVRVRLIPAPRGSGIVASVVPKKLLNMAGIEDVYSSTTGHSRTRGNLAMAVYHALSKTYSFLTPDLWAPTHFQPTPQQEYSDLLAK 477 AGQRTRFK ++A+GD NGH+GLGVKC++EVATAIRG II AK+++VPVRRGYWG G+PHTVPCKV+G+CGSV VRLIPAPRG+GIV++ VPKKLL MAGI+D Y+S G + T GN A A + A+SKTYS+LTPDLW T F +P QE++D L K Sbjct: 118 AGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVK 275 The following BLAST results are available for this feature:
BLAST of CX300722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300722 ID=CX300722; Name=CX300722; organism=Citrus sinensis; type=EST; length=607bpback to top |