EY702449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14 Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWT---------PLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L++++++Y+ Y ++T +D + C LL +V F K++E LDALCD ++P +TE ++++RE DP+DEM+F+++GKL T T RT L + +C + LL W P+ RTVR +V L DDLK ++ Sbjct: 437 LRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNG------------------GRTGFLNSEYLGAGDFC---GEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVAS 600
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14 Identity = 52/185 (28.11%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWT---------PLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD +KP +TE+++ IRE DP++EM+FV++GKL + T G + + KP + +C + LL W P+ RTV+ T+V L DDLK+ ++ Sbjct: 425 LRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTN----GGRTGFFNAVYLKPSD--------------FC---GEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVAS 588
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 46/180 (25.56%), Postives = 88/180 (48.89%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT--------FKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLK 517 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD ++P +TE++++IRE DP+ EM+FV++G+L + T F + + + +D++ + SS+ + P+ RTV+ T+V L +DLK Sbjct: 424 LRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHF--------------------PISTRTVQALTEVEAFALTAEDLK 583
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12 Identity = 32/99 (32.32%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT 298 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ FTE T+++RE DP++EM+F+++G+L + T Sbjct: 453 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVT 551
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L+++V++Y Y +T +D + C L+++V F+ +++ LDA+C +KP FTE T+L+RE DP+DEM+F+++G+L + T G ++ + K E L W+ G P RTV+ T+V L ++LK ++ Sbjct: 449 LRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTD----GGRSGFFNRSLLKEGEFCGEE--LLTWALDPKSGVN------LPSSTRTVKALTEVEAFALTSEELKFVAS 612
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 31/99 (31.31%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT 298 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ +TE T+++RE DP++EM+F+++G+L + T Sbjct: 459 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVT 557
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11 Identity = 47/175 (26.86%), Postives = 83/175 (47.43%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKL---PTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLK 517 L+++++KY+ Y ++T ++ + C LLKKV F+ +++ LDALC +K +TE ++++RE +P+++M+F+++G L TY + S L+ D L W+ PL P+ RTV+ T+V +L DDLK Sbjct: 428 LRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD----------LLTWAL-------DPLSSQFPISSRTVQALTEVEGFLLSADDLK 585
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11 Identity = 47/176 (26.70%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L+Q V+KY Y T +D + C++L+++V F +++E LDA+C+ +KP TE T L+RE DP++EM+F+++G L +YT G + + P + L W+ +P+++ P RTV+ +V L +DL+ ++ Sbjct: 422 LRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTN----GGRTGFFNSCLIGPGDFCGEE--LLTWALD-----PRPVVI-LPSSTRTVKAICEVEAFALKAEDLQFVAS 585
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11 Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP FTE ++L+RE DP++EM+F+++G+L + T G ++ + K E L W+ G P RTV+ T+V L D+LK ++ Sbjct: 465 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTD----GGRSGFYNRSLLK--EGDFCGDELLTWALDPKSGSN------LPSSTRTVKALTEVEAFALIADELKFVAS 628
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 45/176 (25.57%), Postives = 82/176 (46.59%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP +TE ++L+RE DP++EM+F+++G+L + T G ++ + K E L W+ G P RT + T+V L D+LK ++ Sbjct: 464 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTD----GGRSGFFNRSLLK--EGDFCGEELLTWALDPKSGSN------LPSSTRTAKALTEVEAFALIADELKFVAS 627 The following BLAST results are available for this feature:
BLAST of EY702449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702449 ID=EY702449; Name=EY702449; organism=Citrus sinensis; type=EST; length=752bpback to top |