EY702449

Overview
NameEY702449
Unique NameEY702449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.166e-14
Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWT---------PLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L++++++Y+ Y  ++T  +D +                  C  LL +V  F K++E  LDALCD ++P  +TE ++++RE DP+DEM+F+++GKL T T                      RT       L +  +C    + LL W          P+  RTVR   +V    L  DDLK  ++
Sbjct:  437 LRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNG------------------GRTGFLNSEYLGAGDFC---GEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVAS 600          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14
Identity = 52/185 (28.11%), Postives = 90/185 (48.65%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWT---------PLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L++++++Y+ Y  ++T  ++ +                  C +LLKKV  F  ++E  LDA+CD +KP  +TE+++ IRE DP++EM+FV++GKL + T      G +      +  KP +              +C    + LL W          P+  RTV+  T+V    L  DDLK+ ++
Sbjct:  425 LRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTN----GGRTGFFNAVYLKPSD--------------FC---GEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVAS 588          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 46/180 (25.56%), Postives = 88/180 (48.89%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT--------FKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLK 517
            L++++++Y+ Y  ++T  ++ +                  C +LLKKV  F  ++E  LDA+CD ++P  +TE++++IRE DP+ EM+FV++G+L + T        F  + + +     +D++    +  SS+ +                    P+  RTV+  T+V    L  +DLK
Sbjct:  424 LRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDPQSSSHF--------------------PISTRTVQALTEVEAFALTAEDLK 583          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 32/99 (32.32%), Postives = 60/99 (60.61%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT 298
            L+++V++Y  Y   +T  +D +                  C NL+++V  F  ++E  LDA+C+ +KP+ FTE T+++RE DP++EM+F+++G+L + T
Sbjct:  453 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVT 551          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12
Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L+++V++Y  Y   +T  +D +                  C  L+++V  F+ +++  LDA+C  +KP  FTE T+L+RE DP+DEM+F+++G+L + T      G ++      + K  E        L W+     G         P   RTV+  T+V    L  ++LK  ++
Sbjct:  449 LRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTD----GGRSGFFNRSLLKEGEFCGEE--LLTWALDPKSGVN------LPSSTRTVKALTEVEAFALTSEELKFVAS 612          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 31/99 (31.31%), Postives = 60/99 (60.61%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYT 298
            L+++V++Y  Y   +T  +D +                  C NL+++V  F  ++E  LDA+C+ +KP+ +TE T+++RE DP++EM+F+++G+L + T
Sbjct:  459 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVT 557          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 47/175 (26.86%), Postives = 83/175 (47.43%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKL---PTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLK 517
            L+++++KY+ Y  ++T  ++ +                  C  LLKKV  F+ +++  LDALC  +K   +TE ++++RE +P+++M+F+++G L    TY  +     S  L+  D               L W+         PL    P+  RTV+  T+V   +L  DDLK
Sbjct:  428 LRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD----------LLTWAL-------DPLSSQFPISSRTVQALTEVEGFLLSADDLK 585          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 47/176 (26.70%), Postives = 84/176 (47.73%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L+Q V+KY  Y    T  +D +                  C++L+++V  F +++E  LDA+C+ +KP   TE T L+RE DP++EM+F+++G L +YT      G +       +  P +        L W+        +P+++  P   RTV+   +V    L  +DL+  ++
Sbjct:  422 LRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTN----GGRTGFFNSCLIGPGDFCGEE--LLTWALD-----PRPVVI-LPSSTRTVKAICEVEAFALKAEDLQFVAS 585          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 47/176 (26.70%), Postives = 83/176 (47.16%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L+++V++Y  Y   +T  +D +                  C  L+++V  F  ++E  LDA+C+ +KP  FTE ++L+RE DP++EM+F+++G+L + T      G ++      + K  E        L W+     G         P   RTV+  T+V    L  D+LK  ++
Sbjct:  465 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTD----GGRSGFYNRSLLK--EGDFCGDELLTWALDPKSGSN------LPSSTRTVKALTEVEAFALIADELKFVAS 628          
BLAST of EY702449 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 45/176 (25.57%), Postives = 82/176 (46.59%), Query Frame = 2
Query:    2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIRERDPIDEMIFVVQGKLPTYTFKDIQVGSQALIIKDMMAKPHERTSSARWRLLWSTTYCPGFEKPLLLWTPLGKRTVRGSTQVMPLMLWGDDLKMFSN 529
            L+++V++Y  Y   +T  +D +                  C  L+++V  F  ++E  LDA+C+ +KP  +TE ++L+RE DP++EM+F+++G+L + T      G ++      + K  E        L W+     G         P   RT +  T+V    L  D+LK  ++
Sbjct:  464 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTD----GGRSGFFNRSLLK--EGDFCGEELLTWALDPKSGSN------LPSSTRTAKALTEVEAFALIADELKFVAS 627          
The following BLAST results are available for this feature:
BLAST of EY702449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CNGC1_ARATH3.166e-1428.11Cyclic nucleotide-gated ion channel 1 OS=Arabidops... [more]
CNG13_ARATH5.400e-1428.11Putative cyclic nucleotide-gated ion channel 13 OS... [more]
CNG10_ARATH3.870e-1225.56Probable cyclic nucleotide-gated ion channel 10 OS... [more]
CNGC7_ARATH5.055e-1232.32Putative cyclic nucleotide-gated ion channel 7 OS=... [more]
CNGC5_ARATH6.601e-1226.70Probable cyclic nucleotide-gated ion channel 5 OS=... [more]
CNGC8_ARATH8.622e-1231.31Putative cyclic nucleotide-gated ion channel 8 OS=... [more]
CNGC3_ARATH1.471e-1126.86Probable cyclic nucleotide-gated ion channel 3 OS=... [more]
CNG15_ARATH1.921e-1126.70Putative cyclic nucleotide-gated ion channel 15 OS... [more]
CNGC6_ARATH3.276e-1126.70Probable cyclic nucleotide-gated ion channel 6 OS=... [more]
CNGC9_ARATH9.533e-1125.57Putative cyclic nucleotide-gated ion channel 9 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702449 ID=EY702449; Name=EY702449; organism=Citrus sinensis; type=EST; length=752bp
TCTCCAGCAAAAGGTGAAGAAATATAAGTCATACATACGGCGAAAAACTG
ATTACATTGATGTACAAAATCTACTCAATAATCTTCCCAATGAACTCAGA
AGAGAACTAAAGCGCGAACTTTGCTGGAATCTGCTAAAGAAAGTACAAGG
GTTCAGGAAGCTAAATGAAGTAACATTGGATGCTCTATGCGATTGCGTAA
AACCAACTTTCTTCACCGAGCACACTCACTTGATTCGTGAAAGAGACCCA
ATTGACGAGATGATCTTTGTAGTGCAAGGGAAACTGCCCACCTACACCTT
TAAGGATATACAAGTGGGCTCACAAGCTCTCATCATAAAAGATATGATGG
CAAAACCACACGAAAGAACATCTTCTGCAAGATGGCGACTTCTATGGAGC
ACAACCTATTGCCCGGGCTTTGAGAAACCCCTTCTACTTTGGACTCCCCT
AGGCAAACGAACCGTTCGAGGCTCTACACAGGTGATGCCCCTTATGCTTT
GGGGTGATGACTTGAAAATGTTTTCCAATGACTTATGAAATCGTTCGCGC
TCCCCCGCCGGGGGCTCCATGACAAAGAGAAACCGGGAAATTTTCCCCGG
GAAATTGAGGGGGTTTCCACTAAGGGTTTTCTCCCTCTTTGGAAATTAAG
TTTTTGAGGGAAAGGTGAGTCTTTAAGTCTGAAAACGGCAGGTCCCTTTT
CTTCTTGTGGGTTTCTCCGTGTTCCCACGGGCCCTCTTGGGGGCCGACGA
GG
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