CX078583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078583 vs. ExPASy Swiss-Prot
Match: SCL6_ARATH (Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SLC6 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.377e-49 Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = -2 Query: 318 VNLPIGTFCNYPATFXSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPER-LPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWRC 800 VN+ +F + P VL FVK L P I+V DRGC+RTD+PF + H+L S++ L ESLDAVN NLDA+QKIERFL+ P IEK+VL R ER + W+++F+Q GF+P+T SNFTESQA+CLVQRTPV+GFHVEK+ +SL LCWQR EL+ +AWRC Sbjct: 398 VNISAASFSHLPL----VLRFVKHLSPTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAWRC 555
BLAST of CX078583 vs. ExPASy Swiss-Prot
Match: SCL27_ARATH (Scarecrow-like protein 27 OS=Arabidopsis thaliana GN=SCL27 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.541e-45 Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = -2 Query: 318 VNLPIGTFCNYPATFXSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWRC 800 VNLP+ + + +L F+KQL P IVV DRGCDR D PFP+ +IH+LQ ++ LLESLDA N N D IERF V P IEK+++ RH ER PPW+ LF Q GF+P + S E+QA+CL+QR PV+GFHVEKRQSSL +CWQRKEL+ +AW+C Sbjct: 484 VNLPVNSVAS--GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA-NQNQDD-SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
BLAST of CX078583 vs. ExPASy Swiss-Prot
Match: SCL22_ARATH (Scarecrow-like protein 22 OS=Arabidopsis thaliana GN=SCL22 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.177e-40 Identity = 86/166 (51.81%), Postives = 114/166 (68.67%), Query Frame = -2 Query: 318 VNLPIGTFCNYPATFXSVLCFVKQLKPKIVVSLDRGCDRT-DVPFPHHMIHALQSYSCLLESLDAVNVN-LDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQS---SLALCWQRKELILATAWRC 800 VNLPI + + +L F+KQ+ P +VV DR CDR D PFP+ +I+ALQ Y+ LLESLD+ N+N +A IERF V P I+K++ R+ ER PPW+SLF Q GF P+T S E+QA+ L+QR P++GFH+EKRQS SL LCWQRKEL+ +AW+C Sbjct: 460 VNLPISSMVS--GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623
BLAST of CX078583 vs. ExPASy Swiss-Prot
Match: SCL15_ARATH (Scarecrow-like protein 15 OS=Arabidopsis thaliana GN=SCL15 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.590e-17 Identity = 53/147 (36.05%), Postives = 82/147 (55.78%), Query Frame = -2 Query: 321 VKQLKPKIVVSLDRGCDRTDVP----FPHHMIHALQSYSCLLESLDAVNVNLDALQKI-ERFLVYPCIEKIV---LGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWR 737 ++++ PK+VV +D T++ F + AL+ Y+ +LESLDA D ++KI E F++ P I V R H+ E W+ F +G P+ S F + QA+CL+++ V+GFHV KRQ L LCW + L+ +AWR Sbjct: 342 LRRVSPKVVVFVDSE-GWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMT--WREAFCAAGMRPIQQSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 485 The following BLAST results are available for this feature:
BLAST of CX078583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078583 ID=CX078583; Name=CX078583; organism=Citrus sinensis; type=EST; length=801bpback to top |