EY702446

Overview
NameEY702446
Unique NameEY702446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.753e-64
Identity = 129/208 (62.02%), Postives = 154/208 (74.04%), Query Frame = 3
Query:    3 VSLNANLYQPSLS--CNLKLYSGLKIQSPSVFGTGKPNLSGGGYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            VS N  L+QPSLS  C++KLYSGLK QS S   +G  NL+   YGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFS+  LATMLYLD++DDS+R+YMY+NGPGGD+TP+LAIY TM+SLKSPVGTH VG  ++LAGFLL   +KG      L R  L +P   G +R   DD+
Sbjct:    3 VSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSP--AGAARGQADDI 206          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.056e-28
Identity = 66/139 (47.48%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLD 614
            MPIG PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E ++  +A MLYLDS D  K + +YIN PGG VT  +AIY TMQ +KS V T  VG    +  FLL    KG   L       +   P+GGT     D
Sbjct:    1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG-KRLALPHSRIMIHQPSGGTRGQATD 138          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLD 614
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E ++  +A MLYLDS D  K +Y+YIN PGG VT  LAIY TMQ +KS V T  VG    +  FLL    KG   L       +   P+GGT     D
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG-KRLALPHSRIMIHQPSGGTRGQATD 138          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLD 614
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E ++  +A MLYLDS D  K +Y+YIN PGG VT  LAIY TMQ +KS V T  VG    +  FLL    KG   +       +   P+GGT     D
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG-KRMALPHSRIMIHQPSGGTRGQATD 138          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  ++  +A +LYLDS D SK +Y+YIN PGG VT  +AIY TMQ +KSPV T  +G    +  FLL    KG   L       +   P GGT R    D+
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKG-KRLALPHSRIMIHQPLGGTGRRQASDI 140          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  ++  +A +LYLDS D SK +Y+YIN PGG VT  +AIY TMQ +KSPV T  +G    +  FLL    KG   L       +   P GGT R    D+
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKG-KRLALPHSRIMIHQPLGGTGRRQASDI 140          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  ++  +A MLYLDS D SK +Y+YIN PGG VT  LAIY T+Q +KS V T  VG    +  FLL    KG   +       +   P GGTSR    D+
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKG-KRVALPHSRIMIHQPLGGTSRRQASDI 140          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  ++  +A MLYLDS D SK +Y+YIN PGG VT  LAIY T+Q +KS V T  VG    +  FLL    KG   +       +   P GGTSR    D+
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKG-KRVALPHSRIMIHQPLGGTSRRQASDI 140          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG*SGLQCLFREWLYTPPAGGTSRXTLDDL 620
            MPIGTP V YR PG    +WVD++  L  ER++F+G  +++  ++  +A MLYLDS D SK +Y+YIN PGG VT  LAIY T+Q +KS V T  VG    +  FLL    KG   +       +   P GGTSR    D+
Sbjct:    1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKG-KRVALPHSRIMIHQPLGGTSRRQASDI 140          
BLAST of EY702446 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 3
Query:  198 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSSGGLATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYHTMQSLKSPVGTHWVGFGHHLAGFLLPRRQKG 536
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E ++  +  MLYL++ + SK +Y+YIN PGG VT  +A+Y TM  +K+ V T  VG    +A F+L    +G
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQG 113          
The following BLAST results are available for this feature:
BLAST of EY702446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH9.753e-6462.02ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB5.056e-2847.48ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_ANAVT2.124e-2646.04ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANASP3.623e-2645.32Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP3_SYNE76.180e-2643.97ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP66.180e-2643.97ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_SYNSC1.166e-2443.97ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNS91.166e-2443.97ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_SYNPX1.166e-2443.97ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP_OLTVI1.522e-2449.56ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702446 ID=EY702446; Name=EY702446; organism=Citrus sinensis; type=EST; length=891bp
CCGTTTCTCTTAACGCAAACTTATATCAACCTTCTCTGAGCTGTAACCTC
AAGCTTTATTCTGGATTAAAGATTCAATCACCAAGTGTTTTTGGAACTGG
GAAACCTAATTTGAGTGGTGGAGGCTATGGCAGAGTTCATAAGAGCCTCT
ACTCCGGGATTCGTAATGATAAACCAATAAGGGGACGAATTGCAATGATG
CCAATTGGGACACCAAAAGTGCTTTATAGGACGCCTGGTGAGGGATCTTG
GCAATGGGTTGATCTATGGAATGCCCTATATCGAGAACGTGTTATTTTCA
TTGGGCAAAATATAGATGAAGAATTTAGCAGCGGGGGATTGGCAACGATG
TTGTATCTAGACAGTGTTGATGATTCCAAAAGGGTTTATATGTACATCAA
CGGTCCTGGGGGGGATGTTACTCCCACCTTGGCAATTTACCACACTATGC
AGAGCTTGAAGAGCCCTGTTGGCACTCACTGGGTGGGCTTTGGCCATCAT
TTAGCAGGGTTTCTCCTACCACGGCGACAAAAAGGGTAATCGGGTCTGCA
ATGCCTCTTTCGAGAATGGCTTTACACTCCTCCAGCTGGGGGCACCTCCC
GGGNCACGCTTGATGACCTTCCCTAAGGAAGACCAAAGGACCCTCTTAAA
CCCCGCAAAATACCATTTTCCAGGGAAGTTCGCCAAGGAAAACCCGGGCC
CGCCCCTTTAAGAAAAATCCCGACGGGATTTCGCGGAGGGATCAACCCGC
TTTGCCTCCCCCAGGAAGGCTCTCGGGATATGGGGGGCGCCTAAGATCCT
CCAAACCCAGGCCCCCCCTCCTACCTTAGGGAAAAAAACGCCACCCCCAC
AAACTCCCTGAGAACACGCCCCCGCGTCATGGCGGAATCTC
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