EY702445

Overview
NameEY702445
Unique NameEY702445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12918 contig Csv1_Contig12918:573..1443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 5.527e-64
Identity = 143/298 (47.99%), Postives = 182/298 (61.07%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSERSLKSRAILARQVNGIMADQGVRPTVEVEKVAPAGNTXXXXXXXXXXXXXXDNRVSAGKESVTNKAFSEPVPE--HGACFCYDPFERASNHLEGLRKP---FRTGECWNRSDKIAVEIIL*YCSGRYPGTHT*SRYAFPG-------DHTKRELHNASLKSFTKKTV-*KMLQEPEEVA 860
            R I+RLLDPSLQCAR I++EL+KISH C++NELQRFPVLRKRMDEVIG+FLREGLEPSE MIG II+MEMDYINTSHPNFIGG+KAVE A+ Q+KSS++P P+ R KD VEPD   SS   +KSR+ L RQ NGI+ DQGV  + + EK  PA N               D R +  K+S+ NK FSE V +  H     Y            L++P    R  E  +  + + ++I        Y         + P        +HTKRELHN  +K   ++ +  +MLQEP+E+A
Sbjct:  450 RQISRLLDPSLQCARFIFEELIKISHRCMMNELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYINTSHPNFIGGTKAVEAAMHQVKSSRIPHPVARPKDTVEPDRTSSSTSQVKSRSFLGRQANGIVTDQGV-VSADAEKAQPAANASDTRWGIPSIFRGGDTR-AVTKDSLLNKPFSEAVEDMSHNLSMIY------------LKEPPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIA 733          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 4.099e-59
Identity = 131/294 (44.56%), Postives = 179/294 (60.88%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSERSLKSRAILARQVNGIMADQGVRPTVEVEKVAPAGNTXXXXXXXXXXXXXXDNRVSAGKESVTNKAFSEPVPEHGACFCYDPFERASN-HLEGLRKPFRTGECWNRSDKIAVEIIL*YCSGRYPGTHT*SRYAFPG-------DHTKRELHNASL-KSFTKKTV*KMLQEPEEVA 860
            R I+RLLDPSLQCAR I+DEL+KISH C++ ELQRFPVL+KRMDEVIGNFLREGLEPS+ MI  +IEMEMDYINTSHPNFIGG+KAVE A+Q +KSS++P P+ R +D VEP+   SS   +K+R+ L RQ NGI+ DQ V    + E+ APAG+T               +  +A K ++ NK FSE   E         ++  S  +L+      ++ E  +  + + +EI        Y           P        ++TKRELHN  + K + +  + ++L+EP+E+A
Sbjct:  435 RQISRLLDPSLQCARFIFDELVKISHQCMMKELQRFPVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYINTSHPNFIGGTKAVEQAMQTVKSSRIPHPVARPRDTVEPERTASSGSQIKTRSFLGRQANGIITDQAVPTAADAERPAPAGST---SWSGFSSIFRGSDGQAAAKNNLLNKPFSETTQE--------VYQNLSTIYLKEPPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKLYRENLIEELLKEPDELA 717          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 3
Query:   12 IARLLDPSLQCARVIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVE 269
            I  LL+PS +C  ++Y+ELMKI H C   EL R+P L+  + EVI   LRE L+P+ + +  +I++   YINT+HPNF+  ++A++
Sbjct:  456 IKLLLEPSQRCVELVYEELMKICHKCGSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNHPNFLSATEAMD 541          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVE 269
            + + RL +PS QC   +YDEL +I       EL RF  L+ R+ EV+ N L++   P++TMI H+I++E  +INTSHP+F+GG    E
Sbjct:  417 KQVVRLEEPSAQCVEYVYDELQRIVSQLEAKELSRFINLKARVIEVVNNLLQKHKVPTKTMIEHLIKIETAFINTSHPDFVGGEGIFE 504          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 44/138 (31.88%), Postives = 77/138 (55.80%), Query Frame = 3
Query:   21 LLDPSLQCARVIYDELMKISHHCLVNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPL------PITRHKDGVEPD--EAPSSERSLKSRAILARQVNGI 410
            L  P  QC  ++Y+ELMKI H+   +++  FP L+  + E + + LRE L P+ + +  +I ++  YINT+HP+F+G   A+ + L + + +++ L      PI+   D V+PD  E  SS+     ++I  +  N I
Sbjct:  454 LAAPCHQCVELVYEELMKICHYSGDSDISHFPKLQTALVETVSDLLRENLTPTYSFVESLIAIQSAYINTNHPDFLGVQGAMAVVLSRKEQNRLMLSQENDEPISSALDTVKPDGIELYSSDPDTSVKSITNKATNEI 591          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.169e-13
Identity = 40/102 (39.22%), Postives = 69/102 (67.65%), Query Frame = 3
Query:   12 IARLLDPSLQCARVIYDELMKISHHCLVNEL-QRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGGSKAVEIALQQIKSSKVPLPI 314
            I RL DPSL+C  +IYDEL++I +  L   + +R+P+L+    +V+  F R+ ++P+ T++  ++ ME  YINT HP+F+ G +A  +A+ Q ++SK P+P+
Sbjct:  431 IKRLEDPSLKCVSLIYDELVRILNQLLQRPIFKRYPLLKDEFYKVVIGFFRKCMQPTNTLVMDMVAMEGSYINTVHPDFLSGHQA--MAIVQSQNSK-PIPV 529          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11
Identity = 47/159 (29.56%), Postives = 76/159 (47.80%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSERSLKSRAILARQVNGIMADQG 425
            R I RL +PSL+C  ++++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A+ + KSSKVP  +       EP  A S+E   K      R+   + +  G
Sbjct:  419 RQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQ--EPSPAASAEADGKLIQDSRRETKNVASGGG 575          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSE 362
            R I RL +PSL+C  ++++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A+ + KSSKVP  +       EP  A S+E
Sbjct:  432 RQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQ--EPSPAASAE 567          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSE 362
            R I RL +PSL+C  ++++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A+ + KSSKVP  +       EP  A S+E
Sbjct:  432 RQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAVSRDKSSKVPSALAPASQ--EPSPAASAE 567          
BLAST of EY702445 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 3
Query:    6 RPIARLLDPSLQCARVIYDELMKISHHCL---VNELQRFPVLRKRMDEVIGNFLREGLEPSETMIGHIIEMEMDYINTSHPNFIGG----------------SKAVEIALQQIKSSKVPLPITRHKDGVEPDEAPSSERSLKSRAILARQVNGI------MADQGVRPT 437
            R I RL +PSL+C  ++++E+ +I  HC      EL RFP L   + EV+   LR+ L  +  M+ +++ +E+ YINT HP+F                   ++ +  A  + KSSKVP  +       EP  A S+E   K      R+   +      + D G  PT
Sbjct:  425 RQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRNRLARELPSAGSRDKSSKVPSALAPASQ--EPPPAASAEADGKLIQDNRRETKNVPSAGGGIGDGGQEPT 591          
The following BLAST results are available for this feature:
BLAST of EY702445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DRP3A_ARATH5.527e-6447.99Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
DRP3B_ARATH4.099e-5944.56Dynamin-related protein 3B OS=Arabidopsis thaliana... [more]
DNM1_YEAST2.130e-1543.02Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]
DYNA_DICDI1.057e-1443.18Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
YB68_SCHPO4.017e-1431.88Dynamin-like protein C12C2.08 OS=Schizosaccharomyc... [more]
VPS1_SCHPO1.169e-1339.22Vacuolar protein sorting-associated protein 1 OS=S... [more]
DNM1L_HUMAN1.866e-1129.56Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_RAT2.437e-1131.88Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]
DNM1L_BOVIN2.437e-1131.88Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
DNM1L_MOUSE9.260e-1129.59Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702445 ID=EY702445; Name=EY702445; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGATTGCTCGCTTGTTGGATCCTAGTCTTCAGTGTGCGAGG
GTCATATATGATGAGTTAATGAAGATTAGCCATCACTGTCTTGTGAATGA
ACTGCAGCGCTTTCCTGTTCTTAGAAAGCGGATGGATGAGGTCATCGGGA
ACTTTCTGCGAGAAGGCCTTGAGCCCTCCGAGACAATGATTGGACATATC
ATTGAAATGGAGATGGACTATATAAACACTTCCCATCCAAATTTTATTGG
TGGAAGTAAAGCTGTGGAAATTGCACTGCAGCAGATCAAGTCTTCTAAGG
TTCCTTTGCCCATAACCAGGCATAAGGATGGTGTGGAACCCGATGAGGCA
CCAAGCTCCGAGAGAAGCTTAAAGTCTCGAGCTATTCTTGCAAGACAAGT
CAATGGAATCATGGCTGATCAGGGAGTTCGTCCTACAGTGGAAGTTGAAA
AAGTAGCTCCCGCTGGAAACACAAGTGGTTCAAGTTGGGGGATTTCATCA
ATTTTTGGGGGGAGTGATAACCGTGTGTCTGCTGGCAAGGAGAGCGTAAC
AAACAAGGCATTCAGTGAGCCTGTCCCAGAACATGGAGCATGCTTTTGCT
ATGATCCATTTGAGAGAGCCTCCAACCATCTTGAGGGCCTCAGAAAGCCA
TTCAGAACAGGAGAATGTTGGAATCGCAGTGACAAAATTGCTGTTGAGAT
CATACTATGATATTGTTCGGGAAGATATCCAGGGACTCATACCTAAAGCA
GGTATGCATTTCCTGGGGATCATACCAAACGTGAGCTGCATAATGCTTCC
TTAAAAAGCTTTACAAAGAAAACTGTTTGAAAGATGCTTCAGGAGCCTGA
GGAGGTAGCATGAGAAGAAGCG
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