EY702444

Overview
NameEY702444
Unique NameEY702444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10213 contig Csv1_Contig10213:13..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 421.779 bits (1083), Expect = 8.814e-121
Identity = 209/244 (85.66%), Postives = 218/244 (89.34%), Query Frame = 2
Query:   59 MASCINPSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            M+SCINPSTL TSVN FKCLPLATN+AAIRIMAK KPVQCL+S KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE E            KDYNWRKENLYATSLEFRLLRQHGYPVSQEVF+GFKDD+ GFICDDFKGILSLHEASYYSLEGESIMEE WQFTSKHLKE+MI+ N  EEDVFVAEQAKRALELPLHWK
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATNKAAIRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKN-MEEDVFVAEQAKRALELPLHWK 243          

HSP 2 Score: 34.2686 bits (77), Expect = 8.814e-121
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 1
Query:  793 PMVEARWVIHVYEKRETR 846
            PM+EARW IH+YE+RE +
Sbjct:  245 PMLEARWFIHIYERREDK 262          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.667e-50
Identity = 107/228 (46.93%), Postives = 148/228 (64.91%), Query Frame = 2
Query:  122 LATNRAAIRIMAKNKPVQCLVSTKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN-WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            L T+R     +A+  PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V+  +  V  PL+QLELI+ LQRLGL+YHFE E               + W+ ENLYAT+L+FRLLRQHGY VSQEVF+ FKD++  F   +C+D KG+LSL+EAS++ +EGE+I+EE   F++KHL+E +  +  K     +A     +LE PLHW+
Sbjct:   27 LVTSRTRNGYLAR--PVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNKEKN----LATLVNHSLEFPLHWR 248          

HSP 2 Score: 22.7126 bits (47), Expect = 3.667e-50
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  793 PMVEARWVIHVYEKRE 840
            P +EARW I++Y   +
Sbjct:  250 PRLEARWFINIYRHNQ 265          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.130e-42
Identity = 98/216 (45.37%), Postives = 130/216 (60.19%), Query Frame = 2
Query:  167 PVQCLV--STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDD----KVGFICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKE--MMITSNSKEEDVFVAEQAKRALELPLHWK 790
            P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +VK  +  +   L QLELID LQRLG++YHFE E                  K +LYAT+LEFRLLR++GY + QE+F+ FKD+    K     DD KG+L+L+EAS+Y   GE+I+EE   FT+++LK   MMI  N    D  +A   + ALE+PLHW+
Sbjct:   53 PIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRYVMMIDQNIILND-NMAILVRHALEMPLHWR 267          

HSP 2 Score: 22.3274 bits (46), Expect = 4.130e-42
Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 1
Query:  781 ALERPM------VEARWVIHVYEKRETR 846
            ALE P+       EA+W I  YEK + +
Sbjct:  259 ALEMPLHWRTIRAEAKWFIEEYEKTQDK 286          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.511e-37
Identity = 99/265 (37.36%), Postives = 147/265 (55.47%), Query Frame = 2
Query:   41 TASVYPMASCIN----PSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTV------DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVG----FICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDV-FVAEQAKRALELPLHWK 790
            ++S  P+ S I+    P T  TS++  K  P   +++ ++  +++     +  T  DN +       DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  VK  +  V   L QLELID +QRLG++Y FE E             D      +LYAT+L+FRLLRQ+G+ V QE+F+ FK+ K G     I +D  G L L+EAS++  +GESI+EE   FT+K LK+  + S+S   ++  ++     ALE+PL W+
Sbjct:   11 SSSSLPIWSSIDNRFTPKTSITSIS--KPKPKLKSKSNLKSRSRSSTCYSIQCTVVDNPSSTITNNSDRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFTTKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWR 273          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.045e-32
Identity = 82/201 (40.80%), Postives = 115/201 (57.21%), Query Frame = 2
Query:  209 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXK-------DYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD--DFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLH 784
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE E                    D N R  +LYAT+LEFRLLRQHG+ ++Q+VF G     +G   D  D KGILSL+EASY S   ++ ++E   +T+K L++ +  + ++ +   +      ALE+P H
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRN-RWGDLYATALEFRLLRQHGFSIAQDVFDG----NIGVDLDDKDIKGILSLYEASYLSTRIDTKLKESIYYTTKRLRKFVEVNKNETKSYTLRRMVIHALEMPYH 219          

HSP 2 Score: 21.9422 bits (45), Expect = 4.045e-32
Identity = 12/25 (48.00%), Postives = 14/25 (56.00%), Query Frame = 1
Query:  781 ALERPM------VEARWVIHVYEKR 837
            ALE P       +EARW I VY +R
Sbjct:  213 ALEMPYHRRVGRLEARWYIEVYGER 237          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.514e-31
Identity = 87/248 (35.08%), Postives = 140/248 (56.45%), Query Frame = 2
Query:   71 INPSTLATSVNGFKCLPLATNRAA-IRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN---WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK-VGF---ICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            +N S L+  +N    L    ++A  +   A    ++   S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V+  +K+  EP+ QLELI +L+ LGL+  F+ E            K ++     K +LY T+L FRLLRQHG+ +SQ+VF+ FK++K + F   +  D KG+L L+EAS+   +GE  +E   +F +K L++  +     E D  +    + +L+LPLHW+
Sbjct:    6 MNVSILSKPLNCLHNLERRPSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQK-KLDEGGNEIDENLLLWIRHSLDLPLHWR 252          

HSP 2 Score: 21.557 bits (44), Expect = 1.514e-31
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1
Query:  799 VEARWVIHVYEKR 837
            VEARW I  Y +R
Sbjct:  256 VEARWFIDAYARR 268          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.022e-30
Identity = 75/196 (38.27%), Postives = 117/196 (59.69%), Query Frame = 2
Query:  215 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKV----GFICDDFKGILSLHEASYYSLEGESIMEEGWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V+  +K   E + QLELID+LQ LGL+Y F+ E            + ++    +LY T+L FR+LRQHG+ VS++VF  FK +K       +  D KG+L L+EAS+   EGE  +E   +F+++ L+E        E D  ++   + +L+LPLHW+
Sbjct:   52 RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFH--NNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSLRE-KFDEGGDEIDEDLSSWIRHSLDLPLHWR 244          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.335e-30
Identity = 84/227 (37.00%), Postives = 131/227 (57.71%), Query Frame = 2
Query:  131 NRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLEGESIMEEGWQ-FTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            +R   + M K  P   LV        + RRS NYQPS W+H +L S+ + Y  ET     + LK KVK+ + D  +  L+QLELID+LQ+LG++YHFE E                W   ++E+L+ATSLEFRLLRQHG+ VS+ +F    D  +   F  ++  GI+SL+EASY S + ++ + +  + F ++ +++ +   ++K  ++ V E+A  ALE+P HW+
Sbjct:   26 HRFVCKSMTKTTPDTTLVE-------LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDTKLHKVIRPFATEQIRKFVDDEDTK--NIEVREKAYHALEMPYHWR 243          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.346e-29
Identity = 75/204 (36.76%), Postives = 120/204 (58.82%), Query Frame = 2
Query:  203 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV--TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKVGFICDDFKGILSLHEASYYSLEGESIMEEGWQ-FTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWK 790
            L + RRS NYQPS WDH +L S+ + Y +E        LK KVK  +++V     L++LELID+LQ+LG++YHFE E                W   ++E+L+AT+LEFRLLRQHG+ VS+++F    D  +   F  D+   I++L+EASY S + ++ + +  + F ++ ++   +   S+  ++ + E A  ALE+P HW+
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHKVIRPFATEQIRN-FVDDESETYNIMLREMAIHALEIPYHWR 245          

HSP 2 Score: 22.3274 bits (46), Expect = 1.346e-29
Identity = 8/19 (42.11%), Postives = 10/19 (52.63%), Query Frame = 1
Query:  799 VEARWVIHVYEKRETRTTF 855
            +E RW I  YEK+     F
Sbjct:  249 LETRWYIDAYEKKHDMNLF 267          
BLAST of EY702444 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.287e-29
Identity = 77/198 (38.89%), Postives = 119/198 (60.10%), Query Frame = 2
Query:  206 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKGILSLHEASYYSLEGESIMEEGWQ-FTSKHLKEMMIT-SNSKEEDVFVAEQAKRALELPLHWK 790
            TV RRSANYQPS WDH  L S+ + +  +   R  + LK KV+  + D  +  LDQLE ID+LQ+LG++YHFE E            +  N ++ +L+AT+LEFRL RQHG+ VS++VF  F ++   F  DD  G++SL+EASY S + +  ++   + F ++ L++ + T SN       + E   +AL++P +W+
Sbjct:   43 TVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRT-NIQESDLHATALEFRLFRQHGFNVSEDVFDVFMENCGKFDRDDIYGLISLYEASYLSTKLDKNLQIFIRPFATQQLRDFVDTHSNEDFGSCDMVEIVVQALDMPYYWQ 239          
The following BLAST results are available for this feature:
BLAST of EY702444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RLC1_CITLI8.814e-12185.66(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL3.667e-5046.93Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA4.130e-4245.37(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA2.511e-3737.36(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
OCIS_ARATH4.045e-3240.80(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
BPPS_SALOF1.514e-3135.08(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
SSS_SALOF1.022e-3038.27(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
CINS_ARATH1.335e-3037.001,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH1.346e-2936.76Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
MYRS1_ARATH3.287e-2938.89Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702444 ID=EY702444; Name=EY702444; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGCTTCCCAGTATACCTGTAAGCTAGCTTACACTGCATCTG
TATATCCAATGGCTTCTTGCATTAATCCCTCAACCTTGGCTACCTCTGTA
AATGGTTTCAAATGTCTTCCTCTTGCAACAAATAGAGCAGCCATCAGAAT
CATGGCAAAAAATAAGCCAGTCCAATGCCTTGTCAGCACCAAATATGATA
ATTTGACAGTTGATAGGAGATCAGCAAACTACCAACCTTCAATTTGGGAC
CATGATTTTTTGCAGTCACTGAATAGCAACTATACGGATGAAACATACAA
AAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACAGCGATTAAGGATG
TAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAATTTGCAAAGACTT
GGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACATATTGCGTAATAT
CCACAACCATAATAAAGATTATAATTGGAGAAAAGAAAATCTGTATGCAA
CCTCCCTTGAATTCAGACTACTTAGACAACATGGCTATCCTGTTTCTCAA
GAGGTTTTCAGTGGTTTTAAAGACGACAAGGTAGGCTTCATTTGTGATGA
TTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTATTACAGCTTAGAAG
GAGAAAGCATCATGGAGGAGGGCTGGCAATTCACCAGTAAGCATCTTAAA
GAAATGATGATCACCAGCAACAGCAAGGAAGAGGATGTATTTGTAGCAGA
ACAAGCGAAGCGGGCGCTGGAGCTCCCTCTGCATTGGAAAGGCCTATGGT
AGAAGCAAGGTGGGTCATACACGTTTATGAGAAAAGAGAGACCAGAACCA
CCTTTAC
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