EY702440

Overview
NameEY702440
Unique NameEY702440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9651 contig Csv1_Contig9651:17..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.205e-68
Identity = 127/156 (81.41%), Postives = 139/156 (89.10%), Query Frame = 1
Query:  157 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQKLL 624
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGMD++I+PAGVPRKPGMTRDDLF INAGIVKTLCE IA+CC + +
Sbjct:    2 QPIPDVNQRIARISAHLHPPKSQME-ESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 156          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.912e-68
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 1
Query:  157 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AVVRGFLGQQQLE ALTGMD+V+IPAGVPRKPGMTRDDLF INAGIVKTLCE IA+CC
Sbjct:    2 QPIPDVNQRIARISAHLHPPKYQME-ESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC 152          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.338e-65
Identity = 123/151 (81.46%), Postives = 136/151 (90.07%), Query Frame = 1
Query:  175 NQRIARIAAHLHPPTLQIE-GESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQKLL 624
            NQRIARI+AHL+PP L  +  + SGL R+ CRAKGGSPGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT+AVVRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAGIV+TL E IA+CC K +
Sbjct:    4 NQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAI 154          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 4.758e-63
Identity = 121/156 (77.56%), Postives = 132/156 (84.62%), Query Frame = 1
Query:  157 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQKLL 624
            +  SGA+ RI+RIA HL P       +   L R DCRAKGG  GFKVA+LGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDT AVVRGFLGQQQLEDAL GMD+VIIPAGVPRKPGMTRDDLFNINAGIVKTLCE IA+CC K +
Sbjct:    2 EANSGASDRISRIAGHLRPQ----REDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAI 153          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 8.116e-63
Identity = 116/147 (78.91%), Postives = 134/147 (91.16%), Query Frame = 1
Query:  172 ANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            ANQRIARI+AHL P   Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAG+PRKPGMTRDDLF INAGIVKTLCE +A+CC
Sbjct:    7 ANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCC 150          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.361e-62
Identity = 116/148 (78.38%), Postives = 134/148 (90.54%), Query Frame = 1
Query:  172 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            AN+RIA I+AHL P  T Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAGIVKTLCE +A+CC
Sbjct:    7 ANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCC 154          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 235.343 bits (599), Expect = 1.999e-61
Identity = 116/152 (76.32%), Postives = 134/152 (88.16%), Query Frame = 1
Query:  157 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            +  + A +R+ R+A+HL PP  Q+E ES  L   +CRAKG +PGFKVA+LGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+T AVVRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAGIV+TLCE IA+CC
Sbjct:    2 EDAAAAARRMERLASHLRPPASQME-ESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC 152          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 3.770e-60
Identity = 113/148 (76.35%), Postives = 131/148 (88.51%), Query Frame = 1
Query:  172 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            A +RIA I+AHL P  T Q+E ++S +G   CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AVVRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAGIV+TLCE +A+CC
Sbjct:    7 AYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCC 154          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.261e-39
Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 1
Query:  283 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCCQKLL 624
            P  KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G++QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC  IA+ C   L
Sbjct:   33 PERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAL 146          
BLAST of EY702440 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.647e-39
Identity = 78/110 (70.91%), Postives = 92/110 (83.64%), Query Frame = 1
Query:  283 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCERIARCC 612
            P  KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G++QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC  IA+ C
Sbjct:   33 PERKVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYC 142          
The following BLAST results are available for this feature:
BLAST of EY702440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
MDHG_CITLA2.205e-6881.41Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA4.912e-6884.21Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_ARATH1.338e-6581.46Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_SOYBN4.758e-6377.56Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG1_ARATH8.116e-6378.91Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_BRANA2.361e-6278.38Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG_ORYSJ1.999e-6176.32Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG1_BRANA3.770e-6076.35Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHM_CITLA1.261e-3969.30Malate dehydrogenase, mitochondrial OS=Citrullus l... [more]
MDHM_EUCGU1.647e-3970.91Malate dehydrogenase, mitochondrial OS=Eucalyptus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-007-A03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702440 ID=EY702440; Name=EY702440; organism=Citrus sinensis; type=EST; length=642bp
CGGAGCTCTCTCCCTCACGTCAGCAATCTCAGCCCTTTGTTTTCATAATT
ATAAATTAAAAAACAGAAGTAGATGTAGCACCACCGCATCAATTTCATTT
TCTGTGAATTGTTTGTTTTATCACGACTAAGTCTCCAGAAACTCAGAACC
ATGCAGCAGCCAACTTCAGGAGCAAATCAACGCATTGCGAGAATCGCTGC
TCATCTCCATCCACCAACTCTCCAGATAGAGGGAGAGAGTTCGGGTTTGG
GGCGGATGGATTGCAGGGCAAAAGGCGGGTCGCCCGGATTCAAGGTGGCT
GTATTGGGAGCTGCTGGAGGGATTGGACAGCCTCTGGCTATGTTGATGAA
GATCAATCCCTTGGTTTCAGTTCTTCATCTTTATGATGTTGTCAATACTC
CTGGGGTTACTGCCGATATCAGTCACATGGATACAAATGCTGTGGTACGA
GGATTTTTGGGGCAACAGCAATTGGAGGATGCCCTCACGGGCATGGACAT
TGTAATCATTCCCGCTGGTGTTCCTAGGAAACCTGGGATGACTAGGGATG
ATCTGTTCAATATCAATGCCGGGATTGTTAAGACCCTTTGTGAAAGGATA
GCTAGGTGCTGTCAAAAGCTATTGGGACTTGNATAGTAATCC
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