EY680036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 7.274e-37 Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 251 SVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP +P GNPMDNSGYGY Sbjct: 519 SVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP-VPVGNPMDNSGYGY 600
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 9.501e-37 Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 248 SVVSEKVLSSDN KYGYNAATG YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE A P GNPMDNSGYG Sbjct: 513 SVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESA-PVGNPMDNSGYG 593
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.879e-33 Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 251 SVV+EKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVVEIKEPE A P NPMDNSG+GY Sbjct: 418 SVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-AAPLANPMDNSGFGY 499
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.125e-29 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP 206 SVVSEKVLS+DN K+GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP Sbjct: 519 SVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP 586
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17 Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 3 SVVSEKVLSS-DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 221 SVV ++V+ + D YGYNAAT +EDLM AGIIDPTKVVRC LE+A SVAKTFL++D VV EI KE PA AG Sbjct: 180 SVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKAPAPAAG 255
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 242 SVV EK+ D +GYNA TG YEDL+A+GI+DP KVVR L+ A+SVA L ++ +VV+ EPEPAMPAG M G Sbjct: 464 SVVVEKLRDKD-FNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPEPAMPAGGDMGGMG 542
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP-AGNPMDNSGY 245 SV+ EK+ DN YG++AATG Y D++ AGIIDPTKVVR L++A+S+A T L ++C+V EIKE E +P AG M + + Sbjct: 463 SVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNAASIAGTMLTAECLVAEIKEKEEKLPGAGGGMGDMDF 544
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.588e-15 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 6 VVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 251 V++E + + D YGYNAAT ++E+LM GIIDP+KVVRC +E+A SVAKTFL++D VV E+KE E A NP+ G+ Sbjct: 351 VMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTELKEIE-AGAKPNPVAPGAAGF 431
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_SOLUE (60 kDa chaperonin OS=Solibacter usitatus (strain Ellin6076) GN=groL PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.588e-15 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 227 ++V +KV + N+ YGYNAAT YEDL+AAG+IDPTKV R L+HA+S+A L ++ ++ EI E + A PAG P Sbjct: 460 AIVVDKVRENANNNYGYNAATDTYEDLVAAGVIDPTKVTRSALQHAASIAGLMLTTEAMIAEIPEKKSA-PAGGP 533
BLAST of EY680036 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.335e-14 Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 3 Query: 3 SVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 227 S+V EK+ ++ +GYNA T YEDL+ AG+IDPTKV R L++A+S+A L ++ ++VE KE +PA PAG P Sbjct: 463 SIVVEKIRTAKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEALIVEKKEDKPAAPAGGP 537 The following BLAST results are available for this feature:
BLAST of EY680036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 247
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680036 ID=EY680036; Name=EY680036; organism=Citrus sinensis; type=EST; length=629bpback to top |