EY702434

Overview
NameEY702434
Unique NameEY702434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7035 contig Csv1_Contig7035:310..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.059e-84
Identity = 153/159 (96.23%), Postives = 159/159 (100.00%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQELET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.689e-84
Identity = 152/159 (95.60%), Postives = 159/159 (100.00%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQELET+KTSS++EKSYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQELETSKTSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.743e-83
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SSAVEKSYELPDGQVITIGAERFRCPEVLFQPS++GME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  219 AYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.743e-83
Identity = 150/159 (94.34%), Postives = 157/159 (98.74%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SSAVEKSYELPDGQVITIGAERFRCPEVLFQPS++GME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  199 AYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 357
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.973e-83
Identity = 150/159 (94.34%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALDYEQELETAK+SS+VEK+YELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+KSEYDESGPSIVHRKCF
Sbjct:  219 AYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.973e-83
Identity = 150/159 (94.34%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            +YIALDY+QE+ETAKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 SYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.973e-83
Identity = 150/159 (94.34%), Postives = 158/159 (99.37%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            +YIALDY+QE+ETAKTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 SYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 2.973e-83
Identity = 150/158 (94.94%), Postives = 158/158 (100.00%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            YIALDYEQELETAKTSS+VEK+YELPDGQVITIG+ERFRCPEVL+QPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  220 YIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.071e-83
Identity = 149/159 (93.71%), Postives = 159/159 (100.00%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            +YIALD+EQELET+KTSS+VEKSYELPDGQVITIGAERFRCPEVLFQPS+IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKE++ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 SYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT3_PEA (Actin-3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.071e-83
Identity = 152/159 (95.60%), Postives = 156/159 (98.11%), Query Frame = 2 
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALDYEQELETAKTSSAVEK+YELPDGQVITIGAERFRCPEV  QPSMIGMES GIHETT+NSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  219 AYIALDYEQELETAKTSSAVEKTYELPDGQVITIGAERFRCPEVTVQPSMIGMESPGIHETTFNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of EY702434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACT11_SOLTU2.059e-8496.23Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT_GOSHI2.689e-8495.60Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT13_SOLTU1.743e-8394.34Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU1.743e-8394.34Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT7_ARATH2.973e-8394.34Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT1_ORYSJ2.973e-8394.34Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI2.973e-8394.34Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT1_ARATH2.973e-8394.94Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=... [more]
ACT3_SOLTU5.071e-8393.71Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT3_PEA5.071e-8395.60Actin-3 OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702434 ID=EY702434; Name=EY702434; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCATACATTGCCCTTGATTATGAACAAGAATTAGAAACCG
CCAAGACCAGCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTCAG
GTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCAGAAGTCCTTTTCCA
ACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTACA
ACTCCATAATGAAATGTGATGTTGATATTAGGAAGGATCTGTATGGGAAC
ATTGTACTTAGTGGCGGTTCCACCATGTTCCCTGGTATTGCTGATAGAAT
GAGCAAAGAAATCAGTGCATTAGCACCAAGCAGCATGAAGATTAAGGTGG
TTGCTCCTCCCGAGAGGAAATATAGTGTCTGGATAGGAGGATCCATTTTG
GCATCCCTCAGCACTTTCCAGCAAATGTGGATTGCCAAATCTGAGTATGA
TGAGTCTGGCCCTTCAATAGTGCACAGGAAATGCTTCTGATCAGGAGCAA
ATATGGACTGGAGCATGGTGCTATTTTAAAACCAAAATGCTGCTTGCATT
TTCTATTTTAAAACCAAAATGCTGCTTGCATTTTCATTCATTTTATTGCC
TTTCTTGGCATTCTTCATTTCAACGTGTGGACAACAACCTGGAAAGAACA
TAATCGTTGCTGTACTATTTCCAAATTTTTATCCCTTTTTCTCAGTAGTG
ATAAATTGTTACCCCCTCAAT
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