EY720434

Overview
NameEY720434
Unique NameEY720434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11188 contig Csv1_Contig11188:1..859. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY720434 vs. ExPASy Swiss-Prot
Match: P2C19_ARATH (Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana GN=At2g20050 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.370e-27
Identity = 76/152 (50.00%), Postives = 89/152 (58.55%), Query Frame = 1 
Query:  361 ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SPSACVPQILCTCADSMHAGLLLNTYLACPLASILHTALDEQSARFXXXXXXXXIKRFTQERCSLQRVC--LLMF*CGTKVDISG*YTFDSGKGLSGNITFTICGNGRLFSSRDSSGK 807
            EN LSLKRFSKQKVK LGKE QVLKE+NLMK+V  PSA VP+ILCTC D   A +LLNT LACP++S+LH+ LDE S RF        I+   +     +     LLM      + I     F   K LSG  TFTICGN    +     GK
Sbjct:  805 ENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKPSAIVPEILCTCVDQTFAAILLNTTLACPISSLLHSPLDESSVRFITGSLVSAIEDIHKNEILFRGSSPELLMLDQSGYLQI---VDFRFAKKLSGERTFTICGNADYLAPEIVQGK 953
The following BLAST results are available for this feature:
BLAST of EY720434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
P2C19_ARATH2.370e-2750.00Protein phosphatase 2C and cyclic nucleotide-bindi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-D11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720434 ID=EY720434; Name=EY720434; organism=Citrus sinensis; type=EST; length=859bp
CACGCGTCCGATTCCGAAGAAACCTGCCAAAAGTATTGATATCTCATCTC
TTGCTAAAGTTAGCCTCACCGATATGGTAATGAATGCTGTTCTGTTCGTT
GTGTAGACATTTTATCTAACACTGAAAGTGATCTTTTTCTTATCTGATGA
GATTTTCTGTTTAGGAATGGAGAAAGTGTTTATATTCTACTGACTGCAGT
GAGATTGGGCTTGTACTTTTGAGAGACTCAGGTTGGTCTTGTTGTATGGA
CGGAAAAAACCCAAGGATTTTGTGCTTGTTAATAAGGGAAAATACATCTG
TTCTTCTTGAACAGTATATATTCTGATAAATGATTGTTTTGTGAATGCGA
GTGGTTGTCAGAGAATTTTCTTAGCTTGAAAAGGTTTTCAAAGCAGAAGG
TTAAATGCCTGGGAAAGGAAGTCCAGGTGTTAAAGGAGAAGAATCTGATG
AAGAGTGTCAGCCCCTCGGCTTGCGTCCCTCAGATTTTATGCACATGTGC
TGACAGTATGCACGCTGGCCTGCTACTGAACACATATCTTGCTTGCCCTC
TGGCTTCAATACTTCATACAGCACTCGATGAACAATCGGCACGATTCTGT
GCTGCCTCGGNTTGTTGCTGCATTAAAAGATTTACACAAGAGAGGTGTTC
TCTACAGAGGGTGTGTCTCCTGATGTTCTAATGTGGGACAAAAGTGGACA
TCTCAGGTTAGTACACTTTCGATTCGGGGAAAGGCTTATCTGGCAACATA
ACATTCACCATTTGTGGAAATGGCAGACTATTTAGCTCCAGAGATAGTTC
GGGGAAAACGCCCTGGTTTCCCTGGTGACTGGTGGGCCTGGGAACTCCCA
ATGTATTCA
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