EY702391

Overview
NameEY702391
Unique NameEY702391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702391 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.679e-42
Identity = 90/189 (47.62%), Postives = 117/189 (61.90%), Query Frame = 2
Query:   26 AAGGFGGIRILSRPRIPVPFPDTAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGR-----GSGAA-FNVAQGKTYRLRISNVGLQNSLNFRIQNHNMKLVQVDGTHPLQTTYSSLDVHDRLSYSVLVTAAPPARDYYIDASSSFNSTVLPPPAFFITVDRMVRCLAPSPVGPTGPIWMVTK 574
            AAGG+GG+R+ SR  IPVP+ D   DYTVLIGDWY  +HT L+  LD G+ +  PDGI+ING+     GS A  F +  GKTYR+RI NVG++ S+NFRIQNH MKLV+++G+H LQ  Y SLDVH    +  +VTA    +DYY+ ASS F  TV+                +  P GP G  W + +
Sbjct:  135 AAGGYGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWAWSLNQ 323          
BLAST of EY702391 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.861e-36
Identity = 77/164 (46.95%), Postives = 100/164 (60.98%), Query Frame = 2
Query:   26 AAGGFGGIRILSRPRIPVPFPDTAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG------------SGAAFNVAQGKTYRLRISNVGLQNSLNFRIQNHNMKLVQVDGTHPLQTTYSSLDVHDRLSYSVLVTAAPPA-RDYYIDASSSF-NSTV 475
            A+GGFG + I +R  +P+PF +  G+   +IGDWY  NHT LR  LD GK+L +PDG+LING+G                 NV  GKTYR+R+ NVG+  SLNFRIQNH + L++ +G +  Q  ++  DVH   SYS LVT    A  DYYI AS+ F N TV
Sbjct:  135 ASGGFGALIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLINGKGPFKYNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETV 298          

HSP 2 Score: 30.0314 bits (66), Expect = 1.861e-36
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  487 GILHYSRSDGAVSGPVP 537
            GILHYS S G  SGP+P
Sbjct:  306 GILHYSNSKGPASGPLP 322          
BLAST of EY702391 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.424e-36
Identity = 79/164 (48.17%), Postives = 101/164 (61.59%), Query Frame = 2
Query:   26 AAGGFGGIRILSRPRIPVPFPDTAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG------------SGAAFNVAQGKTYRLRISNVGLQNSLNFRIQNHNMKLVQVDGTHPLQTTYSSLDVHDRLSYSVLVTAAPPA-RDYYIDASSSF-NSTV 475
            A+GGFG I I +R  IP+PFP   G+   +IGDWY  +H  LR  LD GK+L +PDG+LING+G                F+V  GKTYR+R+ NVG+  SLNFRIQNH++ LV+ +G +  Q  ++  DVH   SYS LVT    A  DYYI AS+ F N TV
Sbjct:  136 ASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSGKELGMPDGVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETV 299          

HSP 2 Score: 29.261 bits (64), Expect = 2.424e-36
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  490 ILHYSRSDGAVSGPVP 537
            ILHYS S G VSGP+P
Sbjct:  308 ILHYSNSKGPVSGPLP 323          
BLAST of EY702391 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.005e-34
Identity = 82/158 (51.90%), Postives = 98/158 (62.03%), Query Frame = 2
Query:   26 AAGGFGGIRILSRPRIPVPFPDTAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRG----------SGAAF---NVAQGKTYRLRISNVGLQNSLNFRIQNHNMKLVQVDGTHPLQTTYSSLDVHDRLSYSVLVTAAPPA-RDYYIDASS 457
            A+GGFG   +  R  IPVPF    GD TV IGDWY  NHT LR  LD GK L +PDG+LING+G           G  F    V  GKTYRLR+SNVG+  SLNFRIQ HN+ L + +G++ +Q  Y+SLD+H   SYS LVT    A  DYYI AS+
Sbjct:  132 ASGGFGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKDLGMPDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASA 289          
BLAST of EY702391 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.948e-33
Identity = 77/190 (40.53%), Postives = 107/190 (56.32%), Query Frame = 2
Query:    8 SACIPNAAGGFGGIRILSRPRIPVPFPDTAGDYTVLIGDWYKSNHTDLRAHLDKGKKLPLPDGILINGRGSGAA------FNVAQGKTYRLRISNVGLQNSLNFRIQNHNMKLVQVDGTHPLQTTYSSLDVHDRLSYSVLVTAAPPARDYYIDASSSFNSTVLPPPAFFITVDRMVRCLAP-SPVGPTGP 556
            +  +  AAGG+G + + SR  IPVPF + A +Y V +GDWY   H  L+  LD G+ +  PDGI+ING+ +         F +  GKTYR R  N+G+++S+N R Q H MKLV+++G+H +Q  Y SLD+H     SVLVTA    +DYY+  SS F    L      + + R      P SP  PT P
Sbjct:  127 TTALHRAAGGYGALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKILDGGRTIGRPDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSS----VAIIRYANGKGPASPELPTPP 312          
The following BLAST results are available for this feature:
BLAST of EY702391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASOL_BRANA6.679e-4247.62L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
SKS2_ARATH1.861e-3646.95Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH2.424e-3648.17Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKU5_ARATH3.005e-3451.90Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
ASOL_TOBAC1.948e-3340.53L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-E01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702391 ID=EY702391; Name=EY702391; organism=Citrus sinensis; type=EST; length=795bp
CCACGCGTCCGCTTGCATTCCCAACGCAGCCGGTGGGTTTGGAGGAATAA
GGATCCTTAGCCGACCGCGCATTCCCGTTCCCTTCCCAGATACTGCCGGC
GATTACACTGTTCTTATCGGAGATTGGTACAAGTCCAATCACACGGACTT
GAGGGCACATCTTGATAAGGGCAAGAAGCTACCTCTCCCCGATGGAATTC
TTATCAATGGCCGGGGGAGCGGTGCTGCTTTTAATGTTGCACAAGGAAAA
ACTTACAGGCTCAGAATATCAAATGTTGGATTGCAAAACTCACTCAATTT
CCGCATTCAAAACCATAACATGAAGTTGGTACAAGTTGACGGAACACATC
CCCTCCAGACTACCTACTCTTCACTTGATGTTCATGACCGACTATCATAC
TCCGTTTTGGTTACTGCTGCTCCACCTGCACGGGACTATTACATTGATGC
TTCCTCCTCCTTCAACTCCACTGTCCTCCCCCCACCGGCATTCTTCATTA
CAGTAGATCGGATGGTGCGGTGTCTGGCCCCGTCCCCGGTGGGACCAACT
GGCCCAATTTGGATGGTAACTAAAACAAAGTACGCTCCTGACGGGGCTAT
AGTTAACGTAGGGCGGACCACGGGCCTATCCCAGAGGGCTCACAACTATA
TGTGGTTTTTTTTTCCCCGTCCCCAAGTTATCCGGCTTCTTTTAGGTGTG
TGCGGGGAGACTAAGCTGGTAAGGATACAATTTTCTGGACCCAACTGAGT
GGCCCTCTATCCTAACGTGGACCCCCCACACAAATCTTGCGTGGC
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