EY702388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_SOLCE (DNA damage-binding protein 1 OS=Solanum cheesmanii GN=DDB1 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.425e-68 Identity = 121/137 (88.32%), Postives = 127/137 (92.70%), Query Frame = 3 Query: 132 IITHEKEKVTGLKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 +ITHEKEKVTGLKIELLGETSIASTIS LDNA V+IGSSYGDSQL+KLNLQPD KGSYVEVLERYVNLGPIV FCVVDLERQGQGQVVTCSG Y DGS RIVRNGIGINE AS+ELQGIK MWSLRS+TDDP+DT L Sbjct: 286 VITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFL 422 HSP 2 Score: 38.891 bits (89), Expect = 1.425e-68 Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 1 Query: 538 FSEVKFISDTPILAMNLDDEL*QTDIYGFLFSHPDLCFGHD 660 F V FIS+T +LAMNL+DEL +T+I GF S F HD Sbjct: 421 FLVVSFISETRVLAMNLEDELEETEIEGF-NSQVQTLFCHD 460
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_SOLLC (DNA damage-binding protein 1 OS=Solanum lycopersicum GN=DDB1 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.425e-68 Identity = 121/137 (88.32%), Postives = 127/137 (92.70%), Query Frame = 3 Query: 132 IITHEKEKVTGLKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 +ITHEKEKVTGLKIELLGETSIASTIS LDNA V+IGSSYGDSQL+KLNLQPD KGSYVEVLERYVNLGPIV FCVVDLERQGQGQVVTCSG Y DGS RIVRNGIGINE AS+ELQGIK MWSLRS+TDDP+DT L Sbjct: 281 VITHEKEKVTGLKIELLGETSIASTISYLDNAFVFIGSSYGDSQLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDPYDTFL 417 HSP 2 Score: 38.891 bits (89), Expect = 1.425e-68 Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 1 Query: 538 FSEVKFISDTPILAMNLDDEL*QTDIYGFLFSHPDLCFGHD 660 F V FIS+T +LAMNL+DEL +T+I GF S F HD Sbjct: 416 FLVVSFISETRVLAMNLEDELEETEIEGF-NSQVQTLFCHD 455
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1B_ARATH (DNA damage-binding protein 1b OS=Arabidopsis thaliana GN=DDB1B PE=1 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 1.192e-67 Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 3 Query: 132 IITHEKEKVTGLKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 +ITHEKEKVTGLKIELLGETSIAS+IS LDNAVV++GSSYGDSQLIKLNLQPDAKGSYVE+LE+YVNLGPIV FCVVDLERQGQGQVVTCSG Y DGS RIVRNGIGINE AS+ELQGIK MWSL+SS D+ FDT L Sbjct: 281 VITHEKEKVTGLKIELLGETSIASSISYLDNAVVFVGSSYGDSQLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFL 417 HSP 2 Score: 41.2022 bits (95), Expect = 1.192e-67 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 538 FSEVKFISDTPILAMNLDDEL*QTDIYGFLFSHPDLCFGHD 660 F V FIS+T ILAMN++DEL +T+I GFL S F HD Sbjct: 416 FLVVSFISETRILAMNIEDELEETEIEGFL-SEVQTLFCHD 455
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1A_ARATH (DNA damage-binding protein 1a OS=Arabidopsis thaliana GN=DDB1A PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.026e-67 Identity = 116/137 (84.67%), Postives = 126/137 (91.97%), Query Frame = 3 Query: 132 IITHEKEKVTGLKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 +ITHEKEKVTGLKIELLGETSIASTIS LDNAVV++GSSYGDSQL+KLNL PDAKGSYVEVLERY+NLGPIV FCVVDLERQGQGQVVTCSG + DGS R+VRNGIGINE AS+ELQGIK MWSL+SS D+ FDT L Sbjct: 281 VITHEKEKVTGLKIELLGETSIASTISYLDNAVVFVGSSYGDSQLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFL 417 HSP 2 Score: 41.9726 bits (97), Expect = 2.026e-67 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 538 FSEVKFISDTPILAMNLDDEL*QTDIYGFLFSHPDLCFGHD 660 F V FIS+T ILAMNL+DEL +T+I GFL S F HD Sbjct: 416 FLVVSFISETRILAMNLEDELEETEIEGFL-SQVQTLFCHD 455
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_CHICK (DNA damage-binding protein 1 OS=Gallus gallus GN=DDB1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.946e-39 Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 L++ELLGETSIA ++ LDN VV++GS GDSQL+KLN+ + +GSYV +E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LRS + D +L Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHREMDNML 425
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_XENLA (DNA damage-binding protein 1 OS=Xenopus laevis GN=ddb1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.542e-39 Identity = 108/256 (42.19%), Postives = 144/256 (56.25%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTD-DPFDTLLGG*VYQR--YTYFGNES*R*TLTN*HLWFPVLPPRPLFWP*RSLPSSLCQLRHGSARLVRTNLQGAGKMNGKSPSPLSQSMVATSKCQPRLS*PPRRGSLFFFLNLCARDLVQI*IFLCGEYEYSWLCL 923 L++ELLGETSIA ++ LDN VV++GS GDSQL+KL + + +GSYV V+E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LR + D D DTL+ V Q T G E L + + F+ L Q+ S RLV N Q K P S+ + + Q L+ G + ++L + +L Q C E E+ CL Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLTTESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGEEVEETDLAG------FVDDQQTFFCGNVAHQQLIQITSASVRLVSQNPQNL-VSEWKEPQGRKVSVCSCNSRQVLLA----VGRVLYYLEIHPGELRQT---SCTEMEHEVACL 541
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_PONAB (DNA damage-binding protein 1 OS=Pongo abelii GN=DDB1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.659e-39 Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 L++ELLGETSIA ++ LDN VV++GS GDSQL+KLN+ + +GSYV +E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LRS + D L Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTL 425
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_HUMAN (DNA damage-binding protein 1 OS=Homo sapiens GN=DDB1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.659e-39 Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 L++ELLGETSIA ++ LDN VV++GS GDSQL+KLN+ + +GSYV +E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LRS + D L Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTL 425
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_CERAE (DNA damage-binding protein 1 OS=Cercopithecus aethiops GN=DDB1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.659e-39 Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 L++ELLGETSIA ++ LDN VV++GS GDSQL+KLN+ + +GSYV +E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LRS + D L Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTL 425
BLAST of EY702388 vs. ExPASy Swiss-Prot
Match: DDB1_BOVIN (DNA damage-binding protein 1 OS=Bos taurus GN=DDB1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.659e-39 Identity = 77/126 (61.11%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 165 LKIELLGETSIASTISCLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVHFCVVDLERQGQGQVVTCSGPYNDGSRRIVRNGIGINEHASLELQGIK*MWSLRSSTDDPFDTLL 542 L++ELLGETSIA ++ LDN VV++GS GDSQL+KLN+ + +GSYV +E + NLGPIV CVVDLERQGQGQ+VTCSG + +GS RI+RNGIGI+EHAS++L GIK +W LRS + D L Sbjct: 300 LRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTL 425 The following BLAST results are available for this feature:
BLAST of EY702388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702388 ID=EY702388; Name=EY702388; organism=Citrus sinensis; type=EST; length=985bpback to top |