EY720918

Overview
NameEY720918
Unique NameEY720918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720918 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.677e-28
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 3 
Query:  126 MLGVFSSAIVSPPEELVA--AGSRTPSPKTTSTALVDRFLQANSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLXVA 566
            ML VF  +I  PP EL    AG +    KT    + + F      +    + +   +A++H NE+PL+ RS  V D++FC+F GALDN   LR+ YGL++ A E ++++EAYK LRDRAPYPP+ V+  L G FAFI++D   STL +A
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY720918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC9.677e-2842.95Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720918 ID=EY720918; Name=EY720918; organism=Citrus sinensis; type=EST; length=810bp
CCACGCGTCCGGATTTGAACTTTCCAGTTAAAGCCAAAGAGTTCCGAACG
GATCAAAGTTTTCTTGTAGGAGAGAGAAATTTCTAGGGCGAGAAAGCGAG
AGAAAAGGAAATTTGGTAGCTTAAAATGTTGGGAGTGTTCAGCAGCGCGA
TCGTTTCACCTCCAGAGGAGCTGGTGGCGGCCGGAAGCCGGACTCCGTCG
CCGAAGACCACATCGACGGCACTGGTCGACCGTTTCCTCCAGGCCAACTC
GTCTGCTGTGTCCGTACAGGTCGGGGACAACGTCACCCTCGCGTACACTC
ATCAGAACGAGTCTCCTTTACGGCAAAGATCATTTGCTGTGAAAGATGAG
ATCTTCTGCTTGTTTGAGGGAGCACTTGATAACTTGGGAAGCCTGAGGCA
GCAATATGGACTAGCTAAGTCGGCAAATGAAGTGATCTTGGTGATTGAGG
CATACAAGGCTCTGCGTGATCGGGCCCCTTACCCACCGAACCATGTCGTT
GGCCACCTTAGTGGGTACTTTGCCTTCATTGTCTACGACAAGTCCACCTC
CACCTTGTNTGTGGCTTCTGACCAATTTGGTAAGGTTCCTCTTTATTGGG
GAATCACTGCTGATGGACATGTTGCCTTTGCTGATGATGCTGACTTGCTC
AAAGGTGCTTGCGGCAAGTCACTTGCTTCTTTCCCTCGAGGTTGTTTCTT
CTNCACAGCAGTTGGAGGACTGAGAAGCTTTGAGAATCCCAAGAACAGAA
TCCTGCCGTTCTGGCTGGGAAGAGGAAATCTGGGTGCTAATTTAAGGTGG
AAGGGCGGCA
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