EY702375 | Citrus Genome Database

Overview


Name	EY702375
Unique Name	EY702375
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	873

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig10242	contig	Csv1_Contig10242:430..1302.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 5.878e-82
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  116 PAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.917e-81
Identity = 148/170 (87.06%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRA+FY++MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  116 PAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.917e-81
Identity = 149/170 (87.65%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  115 PAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFK 283

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 8.488e-81
Identity = 148/170 (87.06%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  115 PAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 8.488e-81
Identity = 148/170 (87.06%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  115 PAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 4.212e-80
Identity = 145/170 (85.29%), Postives = 155/170 (91.18%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRA+FY+VMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPF+GA LAALYHQVVIRAIPFK
Sbjct:  118 PAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFK 287

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 5.502e-80
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+   WDDHWIFWVGPF+GA LAA+YHQVVIRAIPFK
Sbjct:  117 PAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFK 285

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.502e-80
Identity = 146/170 (85.88%), Postives = 154/170 (90.59%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  W+DHWIFWVGPFVGA LAA+YHQV+IRAIPFK
Sbjct:  118 PAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQ-QGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFK 286

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 9.384e-80
Identity = 144/170 (84.71%), Postives = 153/170 (90.00%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKD  WDDHW+FWVGPF+GA LAALYH +VIRAIPFK
Sbjct:  115 PAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFK 283

[Close]

BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.091e-79
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 3

Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 515
            P    GLFLARKLSLTRALFY++MQCLGA+CGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W+DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  118 PAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQ-QGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 286

The following BLAST results are available for this feature:

BLAST of EY702375 vs. ExPASy Swiss-Prot

BLAST of EY702375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150


Match Name	E-value	Identity	Description
PIP15_ARATH	5.878e-82	88.24	Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ...	[more]
PIP14_ARATH	2.917e-81	87.06	Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ...	[more]
PIP13_ARATH	2.917e-81	87.65	Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3...	[more]
PIP11_VICFA	8.488e-81	87.06	Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1	[more]
PIP11_ARATH	8.488e-81	87.06	Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1...	[more]
PIP2_PEA	4.212e-80	85.29	Probable aquaporin PIP-type 7a OS=Pisum sativum GN...	[more]
PIP12_ORYSJ	5.502e-80	85.88	Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j...	[more]
PIP11_ORYSJ	5.502e-80	85.88	Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G...	[more]
PIP12_ARATH	9.384e-80	84.71	Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2...	[more]
PIP12_MAIZE	2.091e-79	84.12	Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-006-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702375 ID=EY702375; Name=EY702375; organism=Citrus sinensis; type=EST; length=873bp
ATCAACCCTTCGCTGAACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTG
ACACGTGCACTTTTCTACCTGGTGATGCAGTGTCTGGGAGCCATCTGCGG
TGCTGGCGTTGTTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCG
CCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTT
GGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGC
CACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTC
CTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCA
ATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCAT
CTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGAC
CATTCGTTGGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGA
GCCATTCCCTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCA
CCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAAT
ATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTT
CTCTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAAG
AGAGTGGATGATGATGACGGATGGGCCCATGGTTAAGTANGTGGGCGCTG
TCACTTTGTACATTTGTATGCCTATGGATTTGTGCAATGTCATCTTGGGA
ATAATATGGACNAAACTAGTTCTATTNNAAAAAAAAAAAAAAAAAAAAAA
AAAGGCGGCCGCTCTAAAGATCC